| CYTCHRMECIAB: | Class IA and IB cytochrome C signature |
| Seed alignment containing 33 sequences: |
1 11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|-----
CYC_ACENE --------------------------------------------------------------ASFAEAPPGNPAAGEKIFKTKCAQCHTV------DKGAGHKQGPNLNGLFGRQSG-TTAGYSYSAANKN-----MAVNWGYNTLYDYLLNPK--------------KYIPGTKMV--FPGLKKPQDRADLIAYLKQSTAA
CYC_ORYSA --------------------------------------------------------------ASFSEAPPGNPKAGEKIFKTKCAQCHTV------DKGAGHKQGPNLNGLFGRQSG-TTPGYSYSTANKN-----MAVIWEENTLYDYLLNPK--------------KYIPGTKMV--FPGLKKPQERADLISYLKEATS
CYC_KATPE ----------------------------------------------------------------------GDVAKGKKTFVQKCAQCHTV------ENGGKHKVGPNLWGLFGRKTG-QAEGYSYTDANKS-----KGIVWNENTLMEYLENPK--------------KYIPGTKMI--FAGIKKKGERQDLVAYLKSATS
CY2_RHOAC ---------------------------------------------------------------------AGDPDAGQKVFL-KCAACHKI------GPGAKNGVGPSLNGVANRKAG-QAEGFAYSDANKNS-----GLTWDEATFKEYITAPQ--------------KKVPGTKMT--FPGLPNEADRDNIWAYLSQFKADGSK
CYC1_YEAST -----------------------------------------------------------------TEFKAGSAKKGATLFKTRCLQCHTV------EKGGPHKVGPNLHGIFGRHSG-QAEGYSYTDANIK-----KNVLWDENNMSEYLTNPK--------------KYIPGTKMA--FGGLKKEKDRNDLITYLKKACE
CYCM_BRAJA MDSFELNKILGAVLGTCLILLVTSFTANALFSPKMPEKPGFEIAVKEDAGHGKEGGAAAAASEPIEKLLQTASVEKGAAAAKKCGACHTF------EKGGPNRVGPNLYGVVGEARGEGRNGFNFSAAMKG-----KGGTWTFDDLNKFIANPK--------------GFIPGTAMG--FAGIPKDSERADVIAYLNSLSEHPKPLPTASK
CY21_RHOMO ------------------------------------------------------------------------ADAPPPAFN-QCKACHSI-------DAGKNGVGPSLSGAYGRKVG-LAPNYKYSPAHLAS-----GMTIDDAMLTKYLANPK--------------ETIPGNKMGAAFGGLKNPADVAAVIAYLKTVK
CY22_RHOMO ------------------------------------------------------------------------ADAP-AGFT-LCKACHSV-------EAGKNGVGPSLAGVYGRKAG-TISGFKFSDPHIKS-----GLTWDEPTLTKYLADPK--------------TVIPGNKMV--FAGLKNPDDVKAVIEYLKTLK
CYC_TETPY -----------------------------------------------------------GPKEPEVTVPEGDASAGRDIFDSQCSACHAI--------EGDSTAAPVLGGVIGRKAG--QEKFAYSKGMKG-----SGITWNEKHLFVFLKNPS--------------KHVPGTKMA--FAGLPADKDRADLIAYLKSV
CYC_CRIFA ------------------------------------------------------------PPKARAPLPPGDAARGEKLFKGRAAQCHTA------NQGGANGVGPNLYGLVGRHSG-TIEGYAYSKANAE-----SGVVWTPDVLDVYLENPK--------------KFMPGTKMS--FAGMKKPQERADVIAYLETLKG
C550_PARDE ------------------------------------------------MKISIYATLAAITLALPAAAQDGDAAKGEKEFN-KCKACHMIQAPDGTDIIKGGKTGPNLYGVVGRKIA-SEEGFKYGEGILEVAEKNPDLTWTEADLIEYVTDPK------PWLVKMTDDKGAKTKMT--FKMGKNQ---ADVVAFLAQNSPDAGGDGEAAAEGESN
CYC_EUGVI ----------------------------------------------------------------------GDAERGKKLFESRAGQCHSS-------QKGVNSTGPALYGVYGRTSG-TVPGYAYSNANKN-----AAIVWEDESLNKFLENPK--------------KYVPGTKMA--FAGIKAKKDRLDIIAYMKTLKD
CYC7_YEAST ------------------------------------------------------------MAKESTGFKPGSAKKGATLFKTRCQQCHTI------EEGGPNKVGPNLHGIFGRHSG-QVKGYSYTDANIN-----KNVKWDEDSMSEYLTNPK--------------KYIPGTKMA--FAGLKKEKDRNDLITYMTKAAK
CYC_USTSP ------------------------------------------------------------------GFEDGDAKKGARIFKTRCAQCHTL------GAGEPNKVGPNLHGLFGRKSG-TVEGFSYTDANKK-----AGQVWEEETFLEYLENPK--------------KYIPGTKMA--FGGLKKEKDRNDLVTYLREETK
CYC_HORSE ----------------------------------------------------------------------GDVEKGKKIFVQKCAQCHTV------EKGGKHKTGPNLHGLFGRKTG-QAPGFTYTDANKN-----KGITWKEETLMEYLENPK--------------KYIPGTKMI--FAGIKKKTEREDLIAYLKKATNE
C550_THIPA --------------------------------------------------------------------QEGDAAKGEKEFN-KCKACHMVQAPDGTDIVKGGKTGPNLYGVVGRKIA-SEEGFKYGDGILEVAEKNPDLVWTEADLIEYVTDPK------PWLVEKTGDSAAKTKMT--FKLGKNQ---ADVVAFLAQNSPDAGAEAAPAEDAAD
CYC_ISSOR ----------------------------------------------------------------PAPFEQGSAKKGATLFKTRCAQCHTI------EAGGPHKVGPNLHGIFSRHSG-QAEGYSYTDANKR-----AGVEWAEPTMSDYLENPK--------------KYIPGTKMA--FGGLKKAKDRNDLVTYMLEASK
CY2_RHOVA ---------------------------------------------------------------------AGDPVKGEQVFK-QCKICHQV------GPTAKNGVGPEQNDVFGQKAG-ARPGFNYSDAMKNS-----GLTWDEATLDKYLENPK--------------AVVPGTKMV--FVGLKNPQDRADVIAYLKQLSGK
CYC_ARATH -------------------------------------------------------------MQVADISLQGDAKKGANLFKTRCAQCHTL------KAGEGNKIGPELHGLFGRKTG-SVAGYSYTDANKQ-----KGIEWKDDTLFEYLENPK--------------KYIPGTKMA--FGGLKKPKDRNDLITFLEEETK
CY2_RHOVI --------------------------------------------------MRKLVFGLFVLAASVAPAAAQDAASGEQVFK-QCLVCHSI------GPGAKNKVGPVLNGLFGRHSG-TIEGFAYSDANKNS-----GITWTEEVFREYIRDPK--------------AKIPGTKMI--FAGVKDEQKVSDLIAYIKQFNADGSKK
CYC_CAEEL -----------------------------------------------------------------SDIPAGDYEKGKKVYKQRCLQCHVV-------DSTATKTGPTLHGVIGRTSG-TVSGFDYSAANKN-----KGVVWTKETLFEYLLNPK--------------KYIPGTKMV--FAGLKKADERADLIKYIEVESAKSL
C550_THIVE ------------------------------------------------MKISIYATLAALSLALPAVAQEGDAAKGEKEFN-KCKACHMVQAPDGTDIVKGGKTGPNLYGVVGRKIA-SVEGFKYGDGILEVAEKNPDMVWSEADLIEYVTDPK------PWLVEKTGDSAAKTKMT--FKLGKNQ---ADVVAFLAQHSPDAGAEAAPAEGAAN
CYC_HANAN ----------------------------------------------------------------PAPFKKGSEKKGATLFKTRCLQCHTV------EKGGPHKVGPNLHGIFGRQSG-KAEGYSYTDANIK-----KAVEWSEQTMSDYLENPK--------------KYIPGTKMA--FGGLKKEKDRNDLVTYLANATK
CYC_CRION ------------------------------------------------------------PPKAREPLPPGDAAKGEKIFKGRAAQCHTG------AKGGANGVGPNLFGIVNRHSG-TVEGFAYSKANAD-----SGVVWTPEVLDVYLENPK--------------KFMPGTKMS--FAGIKKPQERADLIAYLENLK
CY21_RHOPA ----------------------------------------------------------------------QDAAKGEAVFK-QCMTCHRA---------DKNMVGPALGGVVGRKAG-TAAGFTYSPLNHNSGEA--GLVWTQENIIAYLPDPNAYLKKFLTDKGQADKATGSTKMT--FKLANDQQR-KDVAAYLATLK
CY22_RHOFU ------------------------------------------------------------------------ADAP-PAFG-MCKACHSV-------EAGKNGVGPSLAGVYGRKAG-TLAGFKFSDPHAKS-----GLTWDEPTLTKYLADPK--------------GVIPGNKMV--FAGLKNPADVAAVIAYLKSL
CY2_RHOGL -----------------------------------------------------------------GSAPPGDPVEGKHLFHTICILCHTD-------IKGRNKVGPSLYGVVGRHSG-IEPGYNYSEANIKS-----GIVWTPDVLFKYIEHPQ--------------KIVPGTKMG--YPGQPDPQKRADIIAYLETLK
CY2_RHOCA -------------------------------------------------MKISLTAATVAALVLAAPAFAGDAAKGEKEFN-KCKTCHSIIAPDGTEIVKGAKTGPNLYGVVGRTAG-TYPEFKYKDSIVALGAS--GFAWTEEDIATYVKDPG------AFLKEKLDDKKAKTGMA--FKLAKGG---EDVAAYLASVVK
C550_AQUIT ----------------------------------------------------------------------GDAAKGANVAK-SCGTCHSF------EQGGAKKQGPNLFGITTRGPG-KAEGFNYSPSYKAAAAK--GFAWDAATLQDYITDPT------AFLSNKTGDAAARDKMT--FKLAKPDE-RADVIAYLATLK
CY2_RHOPH ---------------------------------------------------------------------AGDAAVGEKIAKAKCTACHDL------NKGGPIKVGPPLFGVFGRTTG-TFAGYSYSPGYTVMGQK--GHTWDDNALKAYLLDPK------GYVQAKSGDPKANSKMI--FRLEKDDDV-ANVIAYLHTMK
CY21_RHOFU ------------------------------------------------------------------------ADAP-TAFN-QCKACHSI-------EAGKNGVGPSLSGAYGRKVG-LAPNYKYSAAHLAS-----GMTIDEAMLTNYLANPK--------------ATIPGNKMGASFGGLKKPEDVKAVIEYLKTVK
CYC2_RAT ----------------------------------------------------------------------GDAEAGKKIFIQKCAQCHTV------EKGGKHKTGPNLWGLFGRKTG-QAPGFSYTDANKN-----KGVIWTEETLMEYLENPK--------------KYIPGTKMI--FAGIKKKSEREDLIQYLKEATSS
CY22_RHOPA ----------------------------------------------------------------------QDAKAGEAVFK-QCMTCHRA---------DKNMVGPALGGVVGRKAG-TAAGFTYSPLNHNSGEA--GLVWTADNIINYLNDPNAFLKKFLTDKGKADQAVGVTKMT--FKLANEQQR-KDVVAYLATLK