| DNAPOLG: | DNA-polymerase gamma (family A) signature |
| Seed alignment containing 7 sequences: |
1 11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521 531 541 551 561 571 581 591 601 611 621 631 641 651 661 671 681 691 701 711 721 731 741 751 761 771 781 791 801 811 821 831 841 851 861 871 881 891 901 911 921 931 941 951 961 971 981 991 1001 1011 1021 1031 1041 1051 1061 1071 1081 1091 1101 1111 1121 1131 1141 1151 1161 1171 1181 1191 1201 1211 1221 1231 1241 1251 1261 1271 1281 1291 1301 1311 1321 1331 1341 1351 1361 1371 1381 1391 1401 1411 1421 1431 1441 1451 1461 1471 1481 1491 1501 1511 1521 1531 1541 1551
|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|-
DPOG_PICPA ------------------------------------------MIIRR------FVRHLSTSK----SSIRINAVGIQHLAPSLQNQLFG----KSSPRLDEDLINMAKRHLKSNNLIGKKSSLNDPIEIQLPSLQGNTLDEHFYKLGSASLEPYNPLIDELLNL-NIIEPQFEFAFQSGWTRYAPGEPSEKVPY-PLEDSYFFDVETMYKVSQYPVMAVALSDKAWYGWVSPYLTEESTTNDHLIPLNTFETEK------------------FIVGHNVSYDRARALEEYNLKQTKAFWMDTMALHVSVSGMCTRQRGTWIKHNKKEQENTMSVASIKSKVQN--EELQELLDSTSIEDP---MLEDNPWINKSSLNSLERVAEFYCKIKLKKDIRN-SFATEDPDELRGNFDELMQYCAKDVFATGKVFQKVYPKFKKLIPHPVTLAALKDISSCILPTTT-KWEDYIETSERLYQESRRMIEKNLHVICEETVKLKDDPTKPWENDPWLSQLDWTIDPIRLTKKGEIHKNQKLPGYPNWYKQLI--------------------------------------------------------------------------------VKNELKLTTKTRTSPLLLKLAWNGNPLYWIQTQGWCFKVPKNKTEEYEKLNFVMVSLKKLSEDPGFESIRAEDL---KNFTFVKVPHPDGPSARVTNCMTKSCLG----------------------------------------------------------------FFEKGF----------------------------LNSQYPLAKDALQMAVASSYWTSSRERIMNQFVVFEDDM---------------------GYILPQIIPMGTITRRAVENTWLTASNAKKNRLGSELKSLIEAPKGYCFVGADVDSEELWIASLIGDSVFK-IHGGTAIGWMTLEGTKNEGTDLHSKTAKILGISRNEAKIFNYGRIYGAGIKFTTTLLKKFNPALSDAEAKATANALYTATKGISGRYDKKSI-----------------------------------------------WYGGSESIIFNRLEAIAEMAHPKTPVLGAGITAPLQKANLSTNN--FLTSRINWAIQSSGVDYLHLLIISMDYLIKLFDIDARLCITVHDEIRYLVKEEDKFRAAYALQISNLWTRAMFCQQLGINEVPQSCAFFSAVDLDFVLRKEVDLDCVTPSNPDPIPCGKSLDIYQLLQQEDIKG--ADFPRTMHLNDVHYRKRTPVIEMFDKAVDDKTRKFMVSLQIAQDKTEFTKWKRSRGELIVH
DPOG_DROME MQFHLIRK------YASKVSR-EHYASSSVKIFRRVKPPQK-----------VNKPKKPENVENGPTEYAENLVKVQMISRNLHAQLFPQAPRSISEQQVASAKVYKDELRRHGVDIESSAPVSD-VQLKLPALRGANIEEHFHNIAKEQVQPYEELLLPLVQCEQLPKRPKRWAFHTGWTAYDPEDGTATPVDHPLEKGLVFDVEVCVSEGQAPVLATAVSTKRWYSWVSSKLTKHRLSVEKLEPLDVDTDSERPHYTTDELIPLGTTGPGLVVGHNVSYDRARLKEQYLTEDTGTRFVDTMSLHMCVSGVTSYQRAMLKSKKE----------------------PAAEDLGWLEQSSLNSLVELHRLYCGGDT---------------LSKEPRNIFVEGTLEQVRQSFQSLTNYCASDVEATHRILRVLYPLYAERFPHPASLAGMLEMGSAYLPVN-SNWERYIREAQLTY--EDLSIEAKYHLGRRAEEACSLLLDDQYRQNLWLWDEDWSVQELKLK-----------------QPPKRKPLPTVE--LKDSGNTPEERR------LQAKFQHLYDQQALL-PARRPLLPGYPLWYRKLCRKPPAKRADEILEDDEEPWSPGASEISTGMQIAPKLLSLCWEGYPLHYEREQGWGFLVPFRSDS----------------------------EGVDRLPMEQLLAHCPVPEFARLSASKAESDMAFDMLP------GQVEQHLGKRE-------HYKKLSQKQ---QRLETQYQGSGVWCNKVLDDCCFFLKLPHKNGPSFRVGNPLSKDFLNKFAENVLSSGDPSCQAAARVIDIARMMSYWRNNRDRIMGQMVVWLDSQQLPNEFTGEKCQPIA-----YGAICPQVVACGTLTRRAMEPTWMTASNSRPDRLGSELRSMVQAPPGYRLVGADVDSQELWIASVLGDAYACGEHGATPLGWMTLSGSKSNGSDMHSITAKAVGISRDHAKVINYARIYGAGQLFAETLLRQFNPTFSASEAKAKAMKMFSITKGKRVYRLREEFHDELEDRAYSS--YEASRLAIQRNRTLA-EVFHRPK-----------WQGGTESAMFNRLEEIATGSQPRTPFLGGRLSRALEADTGPEQEQRFLPTRINWVVQSGAVDFLHLMLVSMRWL---MGSHVRFCLSFHDELRYLVKEELSPKAALAMHITNLMTRSFCVSRIGLQDLPMSVAFFSSVEVDTVLRKECTMDCKTPSNPHGLRIGYGIQPGQSLSVAEAIEKAGGNDVSQWDWIKKS
DPOG_MOUSE MSRLLWKKVAGAKVASGPVPATEGWVSSSVLAPVPSDGRPP-----------SQMP------SSENGQLRLNPLLIQMLSRGLHEQIFGCGGEMPDEAAVQRS---VEHLQKHGLWGQPATPLPD-VELRLPRLFGGNLDQHFRLLAQKQSLPYLEAAASLLEA-QLPPEPKSWAWAEGWNRYGPE-GEAEPVAIPEERALVFDVEVCLAEGTCPTLAVAISPSAWYSWCSRRLVEERYSW--TSQLSPADLTPLGGSTSASSSTKQDGQEQLVVGHNVSFDRAHIREQYLIQDSRMRFLDTMSMHMAISGLSSFQRSLWMGAKQG-KQQDPAVHKARAEVPEESQWSSDSSWDWMDISSANNLADVHNLYVGGPP---------------LEKEPRELFVKGSMRDIRENFQDLMQYCARDVWATFEVFQQQLPLFLERCPHPVTLAGMLEMGVSYLPVN-QNWERYLTEAQNTY--EELQRDDEEVVVVWLMMPGQLLSGERYKEDPWLWDLEWDLQEFKQKKAKKVKK-PASASKLPIEGAGPFGDP-MD--QEDPGPPSEEEELQRSVTAHNRLQQLRSTTDLL-PKRPQHLPGHPGWYRKLC-----------PRLDDPAWAPGPSLLSLQMRVTPKLMALTWDGFPLHYSDSHGWGYLVPGRRDNLTEPPVSPTVESAAVTCPYRAIESLYRKHCLEQGKQQLEPQEVDLAEEFLLTDSSAMWQTVEELG------CLDVEAEAKMEN---SGLSQPLVLPAACAPKSSQPTYHHGNGPYNDVNIPGC-WFFKLPHKDGNNYNVGSPFAKDFLPK-MEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRVVTRHPAFDEEG---HYGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPTGYVLVGADVDSQELWIAAVLGDAHLAGMHGCTAFGWMTLQGRKSRGTDLHSKTAATVRIHREHAKIFNYGRIYGAGQSFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRLSADGEWLVKQLNLPVDRTEDGWVSLQDLRMIRREASRKSRWKKWEVASERAWTGGTESEMFNKLESIAMSDTPRTPVLGCCISRALE-PSVVQGE--FITSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSLEKRKPAWTLALSGGSVFAPVELYWSGAGS
DPOG_XENLA MNRLLQK-------GTSLVPS---WRTRGCRYRRCSYAPQL-----------HAKP-----LEMETSQRRMNPLNIQMLSKGFHEQIFRGKQVQHAEEDVQRS---ITHLKNHELWGQETSTVPD-VELQLPKMYGNNIEEHFQILAQKQSLPYLEAANDLLNC-QLPAMPQTWAWQSGWTRYTAT-GEKELVDFPDEKAMVFDVEVCVTEGCCPTLAVAASPQNWYSWCSRRLIEGRYTW--SKELLLSDLFPLETSMNCNYMTKNNWTERLVVGHNVSFDRAHIKEQYLIKGSKTRFMDTMSMHMAISGLTGFQRTLWMASKYGKKKGLQEVKQHIKKTRSNFSGSPISSWDWVNISSINNLADVHALYVGGPP---------------LEKEARELFVKGSMSDIRTEFQELMRYCALDVQATHEVFQEQFPLFMERCPHPVTLSGMLEMGVSYLPVN-QNWERYLDEAQTSY--EELQKEMKKSLMKLANDACQLLTKDAYKEDPWLWDLEWDIQESKQKKTKISKK-----QKKANEAAESVGNKLVEDHNEDPGPPTEKEE-SRPSMGKLYLEDLKLKTLPLLPKRNQHLPGHPGWYRKLC-----------PKLEDPDWLPGPGLISLQMRLTPKLMRLTWDGYPLHYSEKHGWGYLVPGRKNN--KLNNEEEEE--IIPCPYRAIEDIYAEYSKNKTKDGCLSQHSTIPEEFMLTDDNSMWQKVEELSRTEMDLSSEVPATAKAKK-RNNSSEHPVKLEMEF---DSLPDNHHGNSPCGDVNVSGC-WFYKLPHKDGNANNVGSPFAKDFLPK-MEDGTLQASTGDSSATRALEINKMISFWRNAHKRISSQMVVWMKKNELHRTITRDPEFDEEN---KYGAILAQVVSAGTITRRAVEPTWLTASNARADRVGSELKAMVQVPPGYHLIGADVDSQELWIAAILGEAHFAGIHGCTAFGWMTLQGKKSSGTDLHSKTASTVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQEQAAEKAKQMYAVTKGIRRYILSKEGEWLVEELGISVERGEENSVNLQDLRKIQKDATKRSRRK-WNLVSRRIWTGGTESQMFNKLETIAMSPSPKTPVLGCRISRALE-PTAVKGE--FITSRVNWVVQSSAVDYLHLMLVAMKWLFEAYDIDGRFCISIHDEVRYLVHSKDRYRAALALQITNLLTRCMFASRLGIQDVPQSVAFFSAVDIDKCLRKEVTMDCSTPSNPNGMEKRYGIPQGEALDIYQILKVTKGVL
DPOG_SCHPO ------------------------MFYKACPSTLTCSKWIHSIIKTKK---FLYCRHYSSKSFIDNAPLRINPVGVQYLSPALQNQVFP----QQNTQISQLHLDLAKFHLAKHQLLNKETIKLPSFNFRLPPLQGKTISEHFYNIGLEFAEPHLSKAIKFSKI-DTPVQPKTWKRQPGWTKYAKDGSISCVPY-PDSDCMVFDVEVLYKVSPFAVVATAVSEDAWYCWLSPWLLGKSENDRQLIPSN--PKGA------------------LFVGHNVSFDRQRIREEYNIKSSRNVFLDTMSLHVATHGMCSRQKPTWFKARKAYIRS----QSTETSEDD---------DSSSFDDDYQNYLKQEPWLAHSSVNSLKDVAKFHCNITLDKSKRD-DFASLEKEPILQKLNELITYCAHDTYSTHQVFKKVFPQFLEVCPHPATFSAMLSLGSVFLPVNH-SWTRYINGVEEQYQQMIQLVDQKLSQYAEKAKDLINTK-DTVLKDPWLRQLDWT--PCNLYRKLKKAT-QEVPVVPKWYKKAYCK------------------------------------------------------------------------------TEKRAVITAKSRLAPILLRLKWKKHPLAWSDTYGWVFSVERTSKDEIEMLLDQGLVPCSREE----DTKLDYNN-----YIFFKVPHKDGPEARCCSPLSKSYHA----------------------------------------------------------------YFEEGI----------------------------LQSDYEVAKKALEMSASCSYWSSARDRIRSQMVVWDKDAELGVPS----------SVDGFGIILPCIIPMGTVTRRAVENTWLTASNSKKNRLGSELKAMIRAPDGYTFVGADVDSEELWIVALMGDSQFR-LHGATALGMMTLEGKKSEGTDLHSKTAAILGVSRDSAKVFNYGRLYGAGLKHTTLLLMQMNPTLKTAEAKELAKKLYASTKGVKSKMSKRLQEMG--------------------------------------LPKLTFWSQGTESFVFNKLEAMAQLPSPRTPVLDAGIQQALSSKNLSKNS--FMTSRVNWAIQSSAVDYLHLLLVSMNHLIKKYYLEARLSLTVHDEVRYLSSDKDKYRVAFALQVANLWTRAFFCQRLGINELPQSVAFFSSVDIDHVLRKDVKMDCVTPSNKVPIPPGEELTIESVLEKLEQSG--QSLEPLEQIQCFVDVKATTSAEITEE--DKKNIAYLKAQAFY
DPOG_HUMAN MSRLLWRKVAGATVGPGPVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGEMPGEAAVRRS---VEHLQKHGLWGQPAVPLPD-VELRLPPLYGDNLDQHFRLLAQKQSLPYLEAANLLLQA-QLPPKPPAWAWAEGWTRYGPE-GEAVPVAIPEERALVFDVEVCLAEGTCPTLAVAISPSAWYSWCSQRLVEERYSW--TSQLSPADLIPLEVPTGASSPTQRDWQEQLVVGHNVSFDRAHIREQYLIQGSRMRFLDTMSMHMAISGLSSFQRSLWIAAKQGKHKVQPPTKQGQKSQRKARRGPAISSWDWLDISSVNSLAEVHRLYVGGPP---------------LEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATHEVFQQQLPLFLERCPHPVTLAGMLEMGVSYLPVN-QNWERYLAEAQGTY--EELQREMKKSLMDLANDACQLLSGERYKEDPWLWDLEWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDP-MD--QEDLGPCSEEEEFQQDVMARACLQKLKGTTELL-PKRPQHLPGHPGWYRKLC-----------PRLDDPAWTPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGVVCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELD------YLEVEAEAKMENLRAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIPGC-WFFKLPHKDGNSCNVGSPFAKDFLPK-MEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRAVIRHPDYDEEG---LYGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISREHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSDEGEWLVRELNLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLESIATSDIPRTPVLGCCISRALE-PSAVQEE--FMTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSLEKRSQPGP
DPOG_YEAST -----------------------------MTKLMVRSECMLRMVRRRPLRVQFCARWFSTKKNTA-EAPRINPVGIQYLGESLQRQVFGSCGGKDEVEQSDKLMELSKKSLKDHGLWGKKTLITDPISFPLPPLQGRSLDEHFQKIGRFNSEPYKSFCEDKFTE--MVARPAEWLRKPGWVKYVPGMAPVEVAY-PDEELVVFDVETLYNVSDYPTLATALSSTAWYLWCSPFICGG-DDPAALIPLNTLNKEQ------------------VIIGHNVAYDRARVLEEYNFRDSKAFFLDTQSLHIASFGLCSRQRPMFMKNNKKKE------AEVESEVHP----------EISIED-----Y-DDPWLNVSALNSLKDVAKFHCKIDLDKTDRD-FFASTDKSTIIENFQKLVNYCATDVTATSQVFDEIFPVFLKKCPHPVSFAGLKSLSKCILPTKLNDWNDYLNSSESLYQQSKVQIESKIVQIIKDIVLLKDKP-DFYLKDPWLSQLDWTTKPLRLTKKGVPAKCQKLPGFPEWYRQLFPS-----------------------------------------------------------------------------KDTVEPKITIKSRIIPILFKLSWENSPVIWSKESGWCFNVPHEQVETYKAKNYVLADSVSQEE----EEIRTHNLGLQCTGVLFKVPHPNGPTFNCTNLLTKSYNH----------------------------------------------------------------FFEKGV----------------------------LKSESELAHQALQINSSGSYWMSARERIQSQFVVPSCKFPNEFQSLSAKSSLNNEKTNDLAIIIPKIVPMGTITRRAVENAWLTASNAKANRIGSELKTQVKAPPGYCFVGADVDSEELWIASLVGDSIFN-VHGGTAIGWMCLEGTKNEGTDLHTKTAQILGCSRNEAKIFNYGRIYGAGAKFASQLLKRFNPSLTDEETKKIANKLYENTKGKTKRSKLFKK----------------------------------------------FWYGGSESILFNKLESIAEQETPKTPVLGCGITYSLMKKNLRANS--FLPSRINWAIQSSGVDYLHLLCCSMEYIIKKYNLEARLCISIHDEIRFLVSEKDKYRAAMALQISNIWTRAMFCQQMGINELPQNCAFFSQVDIDSVIRKEVNMDCITPSNKTAIPHGEALDINQLLDKSNSKLGKPNLDIDSKVSQYAYNYREPVFEEYNKSYTPEFLKYFLAMQVQSDKRDVNRLEDEYLRECTSKEYARDGNTAEYSLLDYIKDVEKGKRTKVRIMGSNFLDGTKNAKADQRIRLPVNMPDYPTLHKIANDSAIPEKQLLENRRKKENRIDDENKKKLTRKKNTTPMERKYKRVYGGRKAFEAFYECANKPLDYTLETEKQFFNIPIDGVIDDVLNDKSNYKKKPSQARTASSSPIRKTAKAVHSKKLPARKSSTTNRNLVELERDITISREY