| HTHLYSR: | LysR bacterial regulatory protein HTH signature |
| Seed alignment containing 14 sequences: |
1 11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331
|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|----
OXYR_ECOLI ------MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAGMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANRECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLLPALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDGHFDKVLKQAV
CATR_PSEPU ------MELRHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLGTLLVVRERPLRLTEAGRFFYEQSCTVLQLQNISDNTRRIGQGQRQWLGIGFAPSTLYKVLPELIRELRQDSELELGLNEMTTLQQVEALKSGRIDIAFGRIRIDDPAIHQQVLCEDPLVAVLPKDHPLASSPLTLAQLAGEAFILYPANPRPSYADHVLALFAHHGMSIHVSQWANELQTAIGLVAVGVGVTLVPASVQQQHRTDIEYVSLLDSGAVSPIILSRRKGDVSPIVQRCLTLIAQQAE
MLER_LACLA ----MSLNLRDLEYFYQLSKLRSFTNVAKHFRVSQPTISYAIKRLETYYDCDLFYKDSSHQVVDLTPEGELLAMRTN---EILSELNHTKKAIHRSSMKDFKVGFPPIISSYLLSKQDNLNFFNALHMIYGGSNELLSLLLNEEIDSSLLGSLEKIKHPQLEIEELFQKEFFIIMSDSHPLANEKELGFKDLLNEDFILLGEHNIHFNAFNRLNEKYNQSANVVLKLDDAHTIKELVRKNLGISLMADIRLSEDFKNLVKVPFIEEDKQFFHINYAYQKNSILSESEKNFLEILKTLK
SYRM_RHIME ---------MDQPTWKRPHRAKFAGVSDAAQQRQMPNLASIDLNLLVDLEALLQYRHITQAAQHVGRSQPAMSRALSRLRGMLKDDLLVAGSRGLVLTPLAECLTQMLPSVLDAIRQMMNLSLAPAQRRWKVTMAMPDHQAVVLLPHLLPRLHERAPHLDIVTDPLLGGALGLLEQGEIDVVVGQMGAAPLGYLRRRLYADSFTCVLRHNHPALAQEWTIEAFAALRHVAIASEPDELFGQIYDRLTKLGLQRGDPMVVSTVLTAAVLIAATDSVLVVPSRVATRVAAMLSLAVIPPPVELRPYEVALIWHERCHRDPEHRWLRGEIAAAASTAG
NOD1_BRAJA -MRFKGLDLNLLVALDALMTERKLTAAARSINLSQPAMSAAITRLRTYFRDELFTMNGRELVPTPRAEALAPAVREALLHIHLSIISWDPFNPAQSDRSFRIILSDFMTLMFFERVVVRVAREAPAVSFELLPFSDEPDELLRRGDVDFLILPEMFMSHTHPRAKLFDERFVCVSCPTNQKLPPQLSIDNYVSMGHVAAQFGKQRPSVEEWLLREHGLRRRVEVAVPGFTMIPPFLSGTDRIATLPLRLAMHFAKAIPLRITELPQPIFPAFTEAVQWPAPHSSDPASLWMREIFLQEASRVEFQSETSAHALSSSQLPTCL
AMPR_PSEAE -MVRPHLPLNALAAFEASARHLSFTRAAIELCVTQAAVSHQVKSLEERLGVALFKRLPRGLMLTHEGESLLPVLCDSFDRIAGLLERFEGGHYRDVLTVGAVGTFTVGWLLPRLEDFQARHPFIDLRLSTHNNRVDIAAEGLDYAIRFGGGAWHGTEALALFEAPLTVLCCPEVAAQLHSPADLLQHTLLRSYRADEWPLWFQAAGLPAHAPLTRSIVFDTSLAMLEAARQGVGVALGPAAMFARQLASESIRRPFATEVSTGSYWLTRLQSRGETSAMLAFRGWLLEMAAVEARGR
CYSB_SALTY -----MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAATSSVTIEALAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVDPLADPDLVRIDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVVDTAVALRSNEEIEAMFQDIKLPEK
ILVY_ECOLI ------MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLGQPLFVRDNRTVTLTEAGEELRVFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAAYSHLPPILDRFRAEHPSVEIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSMLENLAVVLIAPALPCPVRNQVSVEKPDWSTVPFIMADQGPVRRRIELWFRRNKISNPMIYATVGGHEAMVSMVALGCGVALLPEVVLENSPEPVRNRVMILERSDEKTPFELGVCAQKKRLHEPLIEAFWKILPNHK
NODD_RHILE -MRFKGLDLNLLVALDRLMTERKLTAAARAINLSQPAMSAAISRWRDYFRDDLFIIQRRELNPTPAAEPLAPVVREALLHIQLSVIAWDPINPAEFDRRFRIILSDFMALVFFEKIIVRLAREAPGVSFKLLPLDDDPEELLRRGDVDFLILPDLFMSGAHRKARLFEERLVCVGCSTNEQLQGKLFLEQYMSMGHVAAKFGRGLKPSVEQWLLLQQGLKRRIELVVPGFNLIPPLLSGTNRIATIPLRLVKHYEQTIPLRIIEHPLPLLSFTEAVQWPALHNSDPGNIWMREIMIQEASRHWNPRPKVVRLKRPRSFHSRSS
LYSR_ECOLI ---MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEKVIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLPVFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTERTELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKRRMIVETHSAASVCAMVRAGVGISVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLHRPSSALVQAFSGHLQAGLPKLVTSLDAILSSATTA
TFDS_ALCEU ------MEFRQLRYFVAAAEEGNVGAAARRLHISQPPVTRQIHALEQHLGVLLFERSARGVQLTPAGAAFLEDARRM--LELGRTSVDRSRAASRGEIGQLDIGYLGTAIYQTVPALLHAFTQAVPGATLSLALMPKVRQIEALRAGTIHLGVGRFYPQEPGITVEHLHYERLYIAAGSSIARQLRQD
ICIA_ECOLI ---MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD
GLTC_BACSU MDVRQTWSLRQLRYFMEVAEREHVSEAADHLHVAQSAISRQIANLEEELNVTLFEREGRNIKLTPIGKEFLIHVKTAMKAIDYAKEQIDEYLDPHRGTVKIGFPTSLASQLLPTVISAFKEEYPHVEFLLRQGSYKFLIEAVRNRDIDLALLGPVPTNFSDITGKILFTEKIYALVPLNHPLAKQKTVHLIDLRNDQFVLFPEGFVLREMAIDTCKQAGFAPLVSTEGEDLDAIKGLVSAGMGVTLLPESTFAETTPRFTVKIPIEFPQVKRTVGIIKPKNRELAPSANDFYEFVIQFFSKLEQYQ
VRPR_SALDU ---MDFLINKKLKIFITLMETGSFSIATSVLYITRTPLSRVISGLERELKQRLFIRKNGTLIPTEFAQTIYRKVKSHYIFLHALEQEIGPTGKTKQLEIIFDEIYPESLKNLIISALTISGQKTNIMGRAVNSQIIEELCQTNNCIVISARNYFHRESLVCRTSVEGGVMLFIPKKFFLCGKPDINRLAGTPVLFHEGAKNFNLDTIYHFFEQTLGITNPAFSFDNVDLFSSLYRLQQGLAMLLIPVRVCRALGLSTDHALHIKGVALCTSLYYPTKKRETPDYRKAIKLIQQELKQSTF