WORKLIST ENTRIES (1):

AOTCASE View alignment          Aspartate/ornithine carbamoyltransferase superfamily signature
 Type of fingerprint: COMPOUND with 4  elements
Links:
   PRINTS; PR00101 ATCASE; PR00102 OTCASE; PR00098 CPSASE; PR00099 CPSGATASE 
   PRINTS; PR00096 GATASE; PR00097 ANTSNTHASEII
   INTERPRO; IPR002029
   PROSITE; PS00097 CARBAMOYLTRANSFERASE
   PFAM; PF00185 OTCace
   PDB; 1ACM 3Dinfo
   SCOP; 1ACM
   CATH; 1ACM

 Creation date 18-MAR-1992; UPDATE 13-JUN-1999

   1. MARTIN, P.R., COOPERIDER, J.W. AND MULKS, M.H. 
   Sequence of the argf gene encoding ornithine transcarbamoylase from 
   Neisseria gonorrhoeae. 
   GENE 94 139-140 (1990).

   2. FAURE, M., CAMONIA, J.H. AND JACQUET, M.
   Molecular characterisation of a Dictyostelium discoideum gene encoding a
   multifunctional enyme of the pyrimidine pathway.
   EUR.J.BIOCHEM. 179 345-348 (1989).

   3. HUYGEN, R., CRABEEL, M. AND GLANSDORFF, N. 
   Nucleotide sequence of the ARG3 gene of the yeast Saccharomyces cerevisiae 
   encoding ornithine carbamoyltransferase. 
   EUR.J.BIOCHEM. 166 371-377 (1987).

   Carbamoyltransferase enzymes catalyse the association of a specific 
   substrate with carbamoyl-phosphate: ornithine carbamoyltransferase 
   catalyses the synthesis of citrulline from carbamoyl-phosphate and 
   ornithine [1] and is involved in one of the steps of the arginine 
   biosynthetic pathway; aspartate carbamoyltransferase catalyses the 
   formation of carbamoyl-aspartate, the commitment step in the 
   pyrimidine biosynthetic pathway. 
   
   AOTCASE is a 4-element fingerprint that provides a signature for the 
   ornithine/aspartate carbamoyltransferase superfamily. The fingerprint 
   was derived from an initial alignment of 7 sequences: motif 1 encodes a
   region containing 3 residues implicated in binding the phosphoryl group of
   carbamyol phosphate (cf. PROSITE pattern CARBAMOYLTRANSFERASE (PS00097)).
   Four iterations on OWL15.1 were required to reach convergence, at which
   point a true set comprising 49 sequences was identified.
  
   An update on SPTR37_9f identified a true set of 77 sequences, and 7
   partial matches.

  SUMMARY INFORMATION
     77 codes involving  4 elements
      7 codes involving  3 elements
      0 codes involving  2 elements

   COMPOSITE FINGERPRINT INDEX
  
    4|  77   77   77   77  
    3|   6    7    5    3  
    2|   0    0    0    0  
   --+---------------------
     |   1    2    3    4  

True positives..
 PYRB_ARATH     OTC_PYRFU      OTC_HALSA      OTC_ARCFU      
 O58457         OTC_METTH      PYR1_DICDI     O51782         
 O51897         OTC_METJA      OTCA_SYNY3     OTCA_BACSU     
 O87319         OTC1_ECOLI     OTCA_MYCTU     OTCA_MYCBO     
 O27464         OTCA_THEMA     OTC2_ECOLI     PYR1_SQUAC     
 Q84489         PYB2_PEA       PYB3_PEA       PYB1_PEA       
 OTCC_NEIGO     PYRB_METJA     OTC_SCHPO      PYRB_PYRAB     
 PYRB_SALTY     PYRB_ARCFU     OTCC_HAEIN     OTCC_PSEAE     
 O58451         OTC_RANCA      PYRB_ECOLI     OTCA_PSEAE     
 O15804         Q18990         OTC_CORHI      PYRB_SERMA     
 PYRB_VIBS2     O86132         PYR1_HUMAN     PYR1_MESAU     
 OTCC_CLOPE     OTC_ASPTE      OTCA_PSESH     OTC_PEA        
 OTC_RAT        OTC_MOUSE      OTC_HUMAN      OTCA_LACPL     
 O67607         OTC_ARATH      OTC_EMENI      OTC_YEAST      
 PYRB_BACSU     O15636         OTCC_PSESH     PYR1_YEAST     
 OTCC_RHIET     OTC_ASPNG      PYRB_BACCL     O53089         
 PYRB_LACPL     PYRB_SULSO     PYRB_MYCTU     PYRB_PSEPU     
 PYR1_DROME     O52067         PYRB_PSEAE     O25716         
 PYR1_SCHPO     PYRB_LACLE     OTC_PACTA      O76458         
 P96079         
Subfamily:  Codes involving 3 elements
 Subfamily True positives..
 OTCC_MYCPN     PYRB_SYNY3     OTCA_VIBS2     O66726         
 YGEW_ECOLI     P96111         PYRB_TREDE     


  PROTEIN TITLES
   PYRB_ARATH       ASPARTATE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.2) (ASPAR
   OTC_PYRFU        ORNITHINE CARBAMOYLTRANSFERASE (EC 2.1.3.3) (OTCASE) - PYROC
   OTC_HALSA        ORNITHINE CARBAMOYLTRANSFERASE (EC 2.1.3.3) (OTCASE) - HALOB
   OTC_ARCFU        ORNITHINE CARBAMOYLTRANSFERASE (EC 2.1.3.3) (OTCASE) - ARCHA
   O58457           317AA LONG HYPOTHETICAL ORNITHINE CARBAMOYLTRANSFERASE - PYR
   OTC_METTH        ORNITHINE CARBAMOYLTRANSFERASE (EC 2.1.3.3) (OTCASE) - METHA
   PYR1_DICDI       PROTEIN PYR1-3 [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOS
   O51782           ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (ARCB) - BORRELIA 
   O51897           ARCB - BORRELIA AFZELII.
   OTC_METJA        ORNITHINE CARBAMOYLTRANSFERASE (EC 2.1.3.3) (OTCASE) - METHA
   OTCA_SYNY3       ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
   OTCA_BACSU       ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
   O87319           ORNITHINE CARBAMOYLTRANSFERASE - NOSTOC PCC73102.
   OTC1_ECOLI       ORNITHINE CARBAMOYLTRANSFERASE CHAIN I (EC 2.1.3.3) (OTCASE-
   OTCA_MYCTU       ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
   OTCA_MYCBO       ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
   O27464           ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
   OTCA_THEMA       ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
   OTC2_ECOLI       ORNITHINE CARBAMOYLTRANSFERASE CHAIN F (EC 2.1.3.3) (OTCASE-
   PYR1_SQUAC       CAD PROTEIN [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHA
   Q84489           SIMILAR TO D. DISCOIDEUM ASPARTATE TRANSCARBAMYLASE - PARAME
   PYB2_PEA         ASPARTATE CARBAMOYLTRANSFERASE 2 PRECURSOR (EC 2.1.3.2) (ASP
   PYB3_PEA         ASPARTATE CARBAMOYLTRANSFERASE 3 PRECURSOR (EC 2.1.3.2) (ASP
   PYB1_PEA         ASPARTATE CARBAMOYLTRANSFERASE 1 PRECURSOR (EC 2.1.3.2) (ASP
   OTCC_NEIGO       ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (EC 2.1.3.3) (OTCA
   PYRB_METJA       ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
   OTC_SCHPO        ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
   PYRB_PYRAB       ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
   PYRB_SALTY       ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN (EC 2.1.3.2) 
   PYRB_ARCFU       ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
   OTCC_HAEIN       ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (EC 2.1.3.3) (OTCA
   OTCC_PSEAE       ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (EC 2.1.3.3) (OTCA
   O58451           308AA LONG HYPOTHETICAL ASPARTATE CARBAMOYLTRANSFERASE CATAL
   OTC_RANCA        ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
   PYRB_ECOLI       ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN (EC 2.1.3.2) 
   OTCA_PSEAE       ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
   O15804           ASPARTATE TRANSCARBAMOYLASE (EC 2.1.3.2) - PLASMODIUM FALCIP
   Q18990           D2085.1 PROTEIN - CAENORHABDITIS ELEGANS.
   OTC_CORHI        ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
   PYRB_SERMA       ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN (EC 2.1.3.2) 
   PYRB_VIBS2       ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN (EC 2.1.3.2) 
   O86132           ORNITHINE CARBAMOYLTRANSFERASE (EC 2.1.3.3) - BACILLUS LICHE
   PYR1_HUMAN       CAD PROTEIN [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHA
   PYR1_MESAU       CAD PROTEIN [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHA
   OTCC_CLOPE       ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (EC 2.1.3.3) (OTCA
   OTC_ASPTE        ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
   OTCA_PSESH       ORNITHINE CARBAMOYLTRANSFERASE, PHASEOLOTOXIN-SENSITIVE, ANA
   OTC_PEA          ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
   OTC_RAT          ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
   OTC_MOUSE        ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
   OTC_HUMAN        ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
   OTCA_LACPL       ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
   O67607           ORNITHINE CARBAMOYLTRANSFERASE - AQUIFEX AEOLICUS.
   OTC_ARATH        ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
   OTC_EMENI        ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
   OTC_YEAST        ORNITHINE CARBAMOYLTRANSFERASE (EC 2.1.3.3) (OTCASE) (ORNITH
   PYRB_BACSU       ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
   O15636           ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
   OTCC_PSESH       ORNITHINE CARBAMOYLTRANSFERASE, PHASEOLOTOXIN-INSENSITIVE, C
   PYR1_YEAST       URA2 PROTEIN [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPH
   OTCC_RHIET       ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (EC 2.1.3.3) (OTCA
   OTC_ASPNG        ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
   PYRB_BACCL       ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
   O53089           ORNITHINE TRANSCARBAMOYLASE (EC 2.1.3.3) (ORNITHINE CARBAMOY
   PYRB_LACPL       ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
   PYRB_SULSO       ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
   PYRB_MYCTU       ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
   PYRB_PSEPU       ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
   PYR1_DROME       CAD PROTEIN (RUDIMENTARY PROTEIN) [INCLUDES: GLUTAMINE-DEPEN
   O52067           ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
   PYRB_PSEAE       ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
   O25716           ASPARTATE TRANSCARBAMOYLASE (PYRB) - HELICOBACTER PYLORI (CA
   PYR1_SCHPO       URA1 PROTEIN [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPH
   PYRB_LACLE       ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
   OTC_PACTA        ORNITHINE CARBAMOYLTRANSFERASE PRECURSOR (EC 2.1.3.3) (OTCAS
   O76458           ORNITHINE CARBAMOYLTRANSFERASE - GIARDIA INTESTINALIS.
   P96079           ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
 
   OTCC_MYCPN       ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC (EC 2.1.3.3) (OTCA
   PYRB_SYNY3       ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS
   OTCA_VIBS2       ORNITHINE CARBAMOYLTRANSFERASE, ANABOLIC (EC 2.1.3.3) (OTCAS
   O66726           ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN - AQUIFEX AEO
   YGEW_ECOLI       HYPOTHETICAL 40.2 KD PROTEIN IN KDUI-LYSS INTERGENIC REGION 
   P96111           ASPARTATE CARBAMOYLTRANSFERASE WITH FUSED CATALYTIC AND REGU
   PYRB_TREDE       ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2) (ASPARTATE TRANS

SCAN HISTORY OWL15_1 4 100 NSINGLE OWL18_0 1 100 NSINGLE OWL19_1 1 110 NSINGLE OWL26_0 1 160 NSINGLE SPTR37_9f 2 150 NSINGLE INITIAL MOTIF SETS AOTCASE1 Length of motif = 20 Motif number = 1 Carbamoyltransferase motif I - 1 PCODE ST INT FFEASTRTRLSFETSMHRLG PYRB_SALTY 48 48 FFEASTRTRLSFETSMHRLG PYRB_SERMA 48 48 FFEASTRTRLSFETSMHRLG DTECC 49 49 FFEPSTRTCSSFIAAMERLG PYR1_YEAST 1954 1954 FYEPSTRTQCSFTAAMQRLG PYR1_DICDI 1224 1224 FYEVSTRTPCSFAAAMLRLG PYR1_DROME 1968 1968 FFEPSTRTRFSFEVAEKKLG PYRB_BACSU 43 43 AOTCASE2 Length of motif = 12 Motif number = 2 Carbamoyltransferase motif II - 1 PCODE ST INT HPTQTLLDLFTI PYRB_SALTY 134 66 HPTQTLLDLFTI PYRB_SERMA 132 64 HPTQTLLDLFTI DTECC 135 66 HPTQAFLDLFTI PYR1_YEAST 2037 63 HPTQALLDVFTI PYR1_DICDI 1307 63 HSHQALLDIFTD PYR1_DROME 2049 61 HPTQSLLDLMTI PYRB_BACSU 127 64 AOTCASE3 Length of motif = 10 Motif number = 3 Carbamoyltransferase motif III - 1 PCODE ST INT ENMKVLHPLP PYRB_SALTY 259 113 ANLKVLHPLP PYRB_SERMA 255 111 ANMKVLHPLP DTECC 260 113 ENMAIMHPLP PYR1_YEAST 2163 114 DNMIVMHPLP PYR1_DICDI 1432 113 KRSIVLHPLP PYR1_DROME 2174 113 RHAIIMHPAP PYRB_BACSU 242 103 AOTCASE4 Length of motif = 24 Motif number = 4 Carbamoyltransferase motif IV - 1 PCODE ST INT RIDEITTDVDKTPHAWYFQQAGNG PYRB_SALTY 269 0 RIDEIATDVDKTPHAYYFQQAGNG PYRB_SERMA 265 0 RVDEIATDVDKTPHAWYFQQAGNG DTECC 270 0 RVNEIKEEVDYDHRAAYFRQMKYG PYR1_YEAST 2173 0 RINEISPEVDSDPRAAYFRQMENG PYR1_DICDI 1442 0 RLNEISREIDLDPRAAYFRQAEYG PYR1_DROME 2184 0 RGVEIDDSLVESEKSRIFKQMKNG PYRB_BACSU 254 2 FINAL MOTIF SETS AOTCASE1 Length of motif = 20 Motif number = 1 Carbamoyltransferase motif I - 2 PCODE ST INT FYEPSTRTRLSFESAMKRLG PYRB_ARATH 130 130 FQKPSTRTRVSFEVAMAHLG OTC_PYRFU 53 53 FAKPSTRTRLSFETGMTQLG OTC_HALSA 45 45 FELPSTRTRVSFEVAMTDLG OTC_ARCFU 47 47 FQKPSTRTRVSFEVAMAHLG O58457 53 53 FEKSSTRTRVSFEVGAFQMG OTC_METTH 42 42 FYEPSTRTQCSFTAAMQRLG PYR1_DICDI 1928 1928 FEKDSTRTRCAFEIAAYDQG O51782 53 53 FEKDSTRTRCAFEIAAYDQG O51897 52 52 FEKPSTRTRMSFDIAVYELG OTC_METJA 44 44 FYKASTRTRVSFTAAMYQLG OTCA_SYNY3 49 49 FEKSSTRTRVSFEAGMAQLG OTCA_BACSU 53 53 FSKASTRTRVSFTVAMYQLG O87319 47 47 FEKDSTRTRCSFEVAAYDQG OTC1_ECOLI 51 51 FDKNSTRTRFSFELGIAQLG OTCA_MYCTU 46 46 FDKNSTRTRFSFELGIAQLG OTCA_MYCBO 46 46 FYEPSTRTRLSFETAMKRLG O27464 48 48 FEKRSTRTRLAFETAFAEEG OTCA_THEMA 53 53 FEKDSTRTRCSFEVAAFDQG OTC2_ECOLI 51 51 FYEVSTRTSSSFRAAMHRLG PYR1_SQUAC 1986 1986 FEEPSTRTRLSFESAMYDLG Q84489 64 64 FYEPSTRTRLSFESAMRRLG PYB2_PEA 125 125 FYEPSTRTRLSFESAMRRLG PYB3_PEA 131 131 FYEPSTRTRLSFESAMKRLG PYB1_PEA 126 126 FEKTSTRTRCAFEVAARDQG OTCC_NEIGO 51 51 FYEPSTRTRLSFETAMKRLG PYRB_METJA 47 47 FSKRSTRTRVSVESAVSCLG OTC_SCHPO 59 59 FFEPSTRTRLSFESAMHRLG PYRB_PYRAB 51 51 FFEASTRTRLSFETSMHRLG PYRB_SALTY 48 48 FFEPSTRTRMSFETAMKRLG PYRB_ARCFU 48 48 FEKTSTRTRCAFEVAAYDQG OTCC_HAEIN 53 53 FEKTSTRTRCAFEVAAYDQG OTCC_PSEAE 52 52 FFEPSTRTRLSFESAMHRLG O58451 51 51 FEKRSTRTRLSTETGFALLG OTC_RANCA 82 82 FFEASTRTRLSFETSMHRLG PYRB_ECOLI 48 48 FEKASTRTRLSFEAGMIQLG OTCA_PSEAE 48 48 FLEPSTRTRCSFDAAILKLG O15804 67 67 FYEVSTRTSCSFSAAMQRLG Q18990 1923 1923 FSKRSTRTRLSAETAALLLG OTC_CORHI 74 74 FFEASTRTRLSFETSMHRLG PYRB_SERMA 48 48 FFEASTRTRLSFETAIQRLG PYRB_VIBS2 49 49 FEKPSTRTRCAFTTACIDLG O86132 55 55 FYEVSTRTSSSFAAAMARLG PYR1_HUMAN 1969 1969 FYEVSTRTSSSFAAAMARLG PYR1_MESAU 1969 1969 FEKTSTRTRCAFECGAAEEG OTCC_CLOPE 53 53 FSKRSTRTRISTEGATVQLG OTC_ASPTE 85 85 FEKSSTRTRLSFEAGMIQLG OTCA_PSESH 49 49 FAKPSMRTRVSFETGFSLLG OTC_PEA 119 119 FEKRSTRTRLSTETGFALLG OTC_RAT 86 86 FEKRSTRTRLSTETGFALLG OTC_MOUSE 86 86 FEKRSTRTRLSTETGLALLG OTC_HUMAN 86 86 FEKTSTRTRSAFTVAANDLG OTCA_LACPL 53 53 FTKPSTRTRVSFEVGIYQLG O67607 46 46 FAKPSMRTRVSFETGFFLLG OTC_ARATH 119 119 FSKRSTRTRVSTEGAVVQMG OTC_EMENI 83 83 FTKRSTRTRISTEGAATFFG OTC_YEAST 63 63 FFEPSTRTRFSFEVAEKKLG PYRB_BACSU 43 43 FFEDSSRTFSSFCAAMIRLG O15636 58 58 FLKPSGRTSTSFVVASYDEG OTCC_PSESH 54 54 FFEPSTRTCSSFIAAMERLG PYR1_YEAST 1956 1956 FEKTSTRTRCAFEVACSDQG OTCC_RHIET 53 53 FSKRSTRTRISTEGAVVQMG OTC_ASPNG 93 93 FFEPSTRTKCSFEMAERKLG PYRB_BACCL 43 43 FEKNSTRTRAAFTTAAIDLG O53089 54 54 FFENSTRTHTSFEMAERRLG PYRB_LACPL 46 46 FFEPSTRTYLSFQKAIINLG PYRB_SULSO 45 45 FYENSTRTRVSFEVAGKWMS PYRB_MYCTU 51 51 FFENSTRTRTTFELAAQRLS PYRB_PSEPU 65 65 FYEVSTRTPCSFAAAMLRLG PYR1_DROME 1968 1968 FFENSTRTVSSFEIASLRLG O52067 53 53 FFENSTRTRTTFELAAQRLS PYRB_PSEAE 64 64 FFENSTRTVSSFEIASLRLG O25716 53 53 FFEPSTRTSSSFDAAMQRLG PYR1_SCHPO 1982 1982 FFENSTRTHTSFEVAERRLG PYRB_LACLE 81 81 FNKRSTRTRVSSEGAAAYLG OTC_PACTA 80 80 FAKPSLRTRVSLETAMTRLG O76458 50 50 FFEPSTRTRISFELAARRMS P96079 48 48 AOTCASE2 Length of motif = 12 Motif number = 2 Carbamoyltransferase motif II - 2 PCODE ST INT HPTQALLDVYTI PYRB_ARATH 215 65 HPCQALADYMTI OTC_PYRFU 135 62 HPCQALTDMFTM OTC_HALSA 127 62 HPCQVIADLLTI OTC_ARCFU 129 62 HPCQALADYMTI O58457 135 62 HPCQALADMQTI OTC_METTH 124 62 HPTQALLDVFTI PYR1_DICDI 2011 63 HPTQILADLMTI O51782 135 62 HPTQILADLMTI O51897 134 62 HPCQILADLMTI OTC_METJA 126 62 HPCQILADLQTI OTCA_SYNY3 131 62 HPCQALADLLTI OTCA_BACSU 135 62 HPCQVLADLLTI O87319 129 62 HPTQLLADLLTM OTC1_ECOLI 133 62 HPCQVLADLQTI OTCA_MYCTU 128 62 HPCQVLADLQTI OTCA_MYCBO 128 62 HPTQTLLDLYTM O27464 132 64 HPTQALADLMTI OTCA_THEMA 135 62 HPTQLLADLMTM OTC2_ECOLI 133 62 HPTQALLDIFTI PYR1_SQUAC 2069 63 HPTQALLDVYTI Q84489 148 64 HPSQALLDVYTI PYB2_PEA 210 65 HPSQALLDVYTI PYB3_PEA 216 65 HPSQALLDVYTI PYB1_PEA 211 65 HPTQMLADALTM OTCC_NEIGO 133 62 HPTQTLLDLYTI PYRB_METJA 131 64 HPLQALADLLTI OTC_SCHPO 141 62 HPTQTLLDLYTI PYRB_PYRAB 135 64 HPTQTLLDLFTI PYRB_SALTY 134 66 HPTQTLLDLYTI PYRB_ARCFU 132 64 HPTQMLADVLTM OTCC_HAEIN 135 62 HPTQMLADVLTM OTCC_PSEAE 134 62 HPTQTLLDLYTI O58451 135 64 HPIQILADYLTI OTC_RANCA 164 62 HPTQTLLDLFTI PYRB_ECOLI 134 66 HPCQLLADMQTF OTCA_PSEAE 130 62 HPTQSLLDFYTI O15804 151 64 HPTQALLDVYTI Q18990 2006 63 HPTQVLADILTL OTC_CORHI 156 62 HPTQTLLDLFTI PYRB_SERMA 132 64 HPTQTLLDLFSI PYRB_VIBS2 134 65 HPTQMLADFMTV O86132 137 62 HPTQALLDIFTI PYR1_HUMAN 2052 63 HPTQALLDIFTI PYR1_MESAU 2052 63 HPTQILADFLTI OTCC_CLOPE 133 60 HPLQAIADFQTI OTC_ASPTE 167 62 HPCQLLADMQTF OTCA_PSESH 131 62 HPVQIMADALTM OTC_PEA 201 62 HPIQILADYLTL OTC_RAT 168 62 HPIQILADYLTL OTC_MOUSE 168 62 HPIQILADYLTL OTC_HUMAN 168 62 HPTQILADFLTL OTCA_LACPL 135 62 HPCQILSDVFTL O67607 128 62 HPCQIMADALTM OTC_ARATH 201 62 HPLQAVADFQTI OTC_EMENI 165 62 HPLQAICDLLTI OTC_YEAST 145 62 HPTQSLLDLMTI PYRB_BACSU 127 64 HPTQALLDTLTI O15636 141 63 HPTQVLADVMTV OTCC_PSESH 136 62 HPTQAFLDLFTI PYR1_YEAST 2039 63 HPTQMIADVMTM OTCC_RHIET 135 62 HPLQAIADFQTI OTC_ASPNG 175 62 HPTQSLLDLLTI PYRB_BACCL 127 64 HPTQMIADFMTV O53089 135 61 HPSQSLLDMLTI PYRB_LACPL 131 65 HPTQAVIDIYTI PYRB_SULSO 129 64 HPTQALLDALTI PYRB_MYCTU 140 69 HPTQGMLDMLTI PYRB_PSEPU 151 66 HSHQALLDIFTD PYR1_DROME 2049 61 HPTQALLDLLTL O52067 137 64 HPTQGMLDMLTI PYRB_PSEAE 150 66 HPTQALLDLLTL O25716 137 64 HPTQAFLDLYTI PYR1_SCHPO 2065 63 HPSQSMLDMMTI PYRB_LACLE 170 69 HPLQAITDILTI OTC_PACTA 162 62 HPLQMVCDFMTI O76458 133 63 HPTQALLDAYTL P96079 132 64 AOTCASE3 Length of motif = 10 Motif number = 3 Carbamoyltransferase motif III - 2 PCODE ST INT KKAIIMHPLP PYRB_ARATH 342 115 PDYMFMHCLP OTC_PYRFU 262 115 DDAIFMHCLP OTC_HALSA 246 107 DDVVVMHCLP OTC_ARCFU 253 112 SDYMFMHCLP O58457 263 116 PEAIFMHCLP OTC_METTH 251 115 DNMIVMHPLP PYR1_DICDI 2136 113 DDAIFMHCLP O51782 263 116 DDAIFMHCLP O51897 263 117 DDVIVMHCLP OTC_METJA 255 117 PEAIVLHCLP OTCA_SYNY3 258 115 PDYTFLHCLP OTCA_BACSU 263 116 PEAIVLHCLP O87319 256 115 PEVKFLHCLP OTC1_ECOLI 266 121 SDAIVLHCLP OTCA_MYCTU 257 117 SDAIVLHCLP OTCA_MYCBO 257 117 RDLIVMHPLP O27464 255 111 SETIFMHCLP OTCA_THEMA 265 118 PNVKFLHCLP OTC2_ECOLI 266 121 KKMVVMHPLP PYR1_SQUAC 2194 113 QNSIIMHPLP Q84489 274 114 RHAVIMHPLP PYB2_PEA 337 115 RHAVIMHPLP PYB3_PEA 343 115 NHAVVMHPLP PYB1_PEA 338 115 PQVKFMHCLP OTCC_NEIGO 265 120 KKFIIMHPLP PYRB_METJA 255 112 PSCKFMHCLP OTC_SCHPO 269 116 DELRIMHPLP PYRB_PYRAB 260 113 ENMKVLHPLP PYRB_SALTY 259 113 DSMIVMHPLP PYRB_ARCFU 253 109 PKVKFMHCLP OTCC_HAEIN 267 120 PRAKFMHCLP OTCC_PSEAE 266 120 DSLRIMHPLP O58451 260 113 PNWIFLHCLP OTC_RANCA 292 116 ANMKVLHPLP PYRB_ECOLI 259 113 DDVLFMHCLP OTCA_PSEAE 251 109 DDTKILHPLP O15804 290 127 SLPIVMHPLP Q18990 2148 130 PDWKFMHCLP OTC_CORHI 311 143 ANLKVLHPLP PYRB_SERMA 255 111 DNLKVLHPLP PYRB_VIBS2 259 113 DNVIFLHCLP O86132 267 118 KKMVVMHPMP PYR1_HUMAN 2177 113 KKMVVMHPMP PYR1_MESAU 2177 113 KNTLFMHCLP OTCC_CLOPE 265 120 ENWKFMHCLP OTC_ASPTE 308 129 KDVLFMHCLP OTCA_PSESH 252 109 SKAFFMHCLP OTC_PEA 326 113 SDWTFLHCLP OTC_RAT 296 116 SDWTFLHCLP OTC_MOUSE 296 116 SDWTFLHCLP OTC_HUMAN 296 116 SSTIVMHCLP OTCA_LACPL 265 118 SSVKVMHCLP O67607 254 114 QKAYFMHCLP OTC_ARATH 326 113 EGWKFMHCLP OTC_EMENI 306 129 PNYKFMHCLP OTC_YEAST 282 125 RHAIIMHPAP PYRB_BACSU 242 103 EKMIVMHPLP O15636 280 127 ADTIFMHCLP OTCC_PSESH 266 118 ENMAIMHPLP PYR1_YEAST 2165 114 PQTKFMHCLP OTCC_RHIET 267 120 EGWRFMHCLP OTC_ASPNG 317 130 SGAIILHPAP PYRB_BACCL 244 105 ENMIIMHCLP O53089 265 118 KHAIIMHPAP PYRB_LACPL 251 108 KDSIILHPLP PYRB_SULSO 252 111 GHAVVLHPGP PYRB_MYCTU 260 108 PDAIVMHPGP PYRB_PSEPU 272 109 KRSIVLHPLP PYR1_DROME 2174 113 KEVIILHPGP O52067 258 109 PDAIVMHPGP PYRB_PSEAE 272 110 KEVIILHPGP O25716 258 109 SHCIVMHPLP PYR1_SCHPO 2191 114 DDAIIMHPGP PYRB_LACLE 295 113 ENWKFMHCLP OTC_PACTA 293 119 KRSIFMNCLP O76458 274 129 PQAPLLHPGP P96079 249 105 AOTCASE4 Length of motif = 24 Motif number = 4 Carbamoyltransferase motif IV - 2 PCODE ST INT RLDEITADVDADPRAAYFRQAKNG PYRB_ARATH 352 0 RGEEVTDDVIDSPNSVVWDQAENR OTC_PYRFU 274 2 RGEEVTAEVADGPQSVIFDQAENR OTC_HALSA 258 2 RGEEITDEVMEGKHSIVFDQAENR OTC_ARCFU 265 2 RGEEVTDDVIDSPNSVVWDEAENR O58457 275 2 RGQETTAEVIDGPHSVVWDQAENR OTC_METTH 263 2 RINEISPEVDSDPRAAYFRQMENG PYR1_DICDI 2146 0 DGIEVTEEIFESKNSVVFDVAENR O51782 292 19 DGIEVTEEIFESKNSVVFDVAENR O51897 292 19 RGYEITDDVIDGEHSVVYDEAENR OTC_METJA 267 2 RGEEITDAVMEGPQSRLWDQAENR OTCA_SYNY3 270 2 REEEVTAEIIDGPNSAVFQQAENR OTCA_BACSU 275 2 RGEEITEAVIEGSQSRVWEQAENR O87319 268 2 GGMEVTDEVFESAASIVFDQAENR OTC1_ECOLI 296 20 RGDEITDAVMDGPASAVWDEAENR OTCA_MYCTU 269 2 RGDEITDAVMDGPASAVWDEAENR OTCA_MYCBO 269 2 RIDEISPEVDSLPQAMYFRQAFYG O27464 265 0 KGQEVTYEVIEGKQSRVWDEAENR OTCA_THEMA 277 2 GGMEVTDEVFESAASIVFDQAENR OTC2_ECOLI 296 20 RVNEVSVEVDSDPRAAYFRQAENG PYR1_SQUAC 2204 0 RVDEISPDVDTNHRAVYFDQVERG Q84489 284 0 RLDEITVDVDADPRAAYFRQAKYG PYB2_PEA 347 0 RLDEITVDVDADPRAAYFRQAKYG PYB3_PEA 353 0 KLDEIEADVDNDPRAAYFRQAKNG PYB1_PEA 348 0 NGVEVTEEVFESPAGIVFDQAENR OTCC_NEIGO 294 19 RVDEIDYDVDDLPQAKYFKQSFYG PYRB_METJA 265 0 HPEEVSDEVFYGENSLVFQEAENR OTC_SCHPO 280 1 RVDEIHPEVDNTKHAIYFRQVFNG PYRB_PYRAB 270 0 RIDEITTDVDKTPHAWYFQQAGNG PYRB_SALTY 269 0 RVDEIHPSVDSTKHARYFQQSFYG PYRB_ARCFU 263 0 NGIEVTEEVFESPMNIAFEQAENR OTCC_HAEIN 298 21 NGIEVTEDVFESPYNIAFEQAENR OTCC_PSEAE 297 21 RVDEIHPEVDKTKHAIYFKQVFNG O58451 270 0 KPEEVDDEVFYCPKSLVFQEAENR OTC_RANCA 303 1 RVDEIATDVDKTPHAWYFQQAGNG PYRB_ECOLI 269 0 RGEEISEELLDDPRSVAWDQAENR OTCA_PSEAE 263 2 RVNEIKVEVDSNPKSVYFTQAENG O15804 300 0 RVDEIAVELDHDERAAYFRQAKNG Q18990 2158 0 KQDEVDDEVFYGPRSLVFQESDNR OTC_CORHI 322 1 RIDEIATDVDKTPHAYYFQQAGNG PYRB_SERMA 265 0 RVDEIAVDVDKTPYAYYFQQAENG PYRB_VIBS2 269 0 KEMEVTDEVFRSKHSKVFDEAENR O86132 296 19 RVNEISVEVDSDPRAAYFRQAENG PYR1_HUMAN 2187 0 RVNEISVEVDSDPRAAYFRQAENG PYR1_MESAU 2187 0 DIREVEDEVFRSKNSVVFDEAENR OTCC_CLOPE 294 19 HPEEVSDEVFYSNRSLVFPEAENR OTC_ASPTE 319 1 RGEEISVDLLDDSRSVAWDQAENR OTCA_PSESH 264 2 RGVEVTDEVVEAPYSIVFPQAENR OTC_PEA 338 2 KPEEVDDEVFYSPRSLVFPEAENR OTC_RAT 307 1 KPEEVDDEVFYSPRSLVFPEAENR OTC_MOUSE 307 1 KPEEVDDEVFYSPRSLVFPEAENR OTC_HUMAN 307 1 TAFEITDDVFQSKQAVVFEEAGNR OTCA_LACPL 294 19 KGQEITEEVFEKNADFIFTQAENR O67607 266 2 RGVEVTNGVVEAPYSIVFPQAENR OTC_ARATH 338 2 HPEEVSDEVFYSNRSLVFPEAENR OTC_EMENI 317 1 HQEEVSDDVFYGEHSIVFEEAENR OTC_YEAST 293 1 RGVEIDDSLVESEKSRIFKQMKNG PYRB_BACSU 254 2 RNDELSTTVDADPRAAYFRQMRYG O15636 290 0 DLVEVEDSVFEGPQSRVFDQGENR OTCC_PSESH 290 14 RVNEIKEEVDYDHRAAYFRQMKYG PYR1_YEAST 2175 0 NGLEVTNDVFESEANVAFEQAENR OTCC_RHIET 297 20 HPEEVADEVFYGHRSLVFPEAENR OTC_ASPNG 328 1 RGVEIASELVEAKASRIFKQMENG PYRB_BACCL 256 2 QEMEITDEAFRSKYARQFEEAENR O53089 294 19 RGVELASDLVEAPQSRIFQQMTNG PYRB_LACPL 263 2 RVNEIDRKVDKTTKAKYFEQASYG PYRB_SULSO 262 0 RGMEITSSVADSSQSAVLQQVSNG PYRB_MYCTU 272 2 RGVEIESAVADGKHSVILNQVTYG PYRB_PSEPU 284 2 RLNEISREIDLDPRAAYFRQAEYG PYR1_DROME 2184 0 RDIDIESAVLEDKRSKVLEQVKNG O52067 270 2 RGVEIESAVADGAQSVILNQVTYG PYRB_PSEAE 284 2 RDIDIESAVLEDERSKVLEQVKNG O25716 270 2 NREISEEVDFDQRRAAYFRQMRYG PYR1_SCHPO 2202 1 RGVEWDGDLVEAPKSRYAVQMHNG PYRB_LACLE 307 2 PEEVHDEVFYDEERSLVFEEGENR OTC_PACTA 305 2 RGEEQTASVIDGPKSVCYDEAGNR O76458 286 2 RDVELEGTLADSARSLVNRQVQNG P96079 261 2

User query: Display/Full Code "AOTCASE"