WORKLIST ENTRIES (1):

CERVTRCPTASE View alignment     C.elegans hypothetical protein (pol-like reverse transciptase) signature
 Type of fingerprint: COMPOUND with 10 elements
Links:
   PFAM; PF00078 rvt
   PDB; 1HMV 3Dinfo
   SCOP; 1HMV
   CATH; 1HMV

 Creation date 30-MAR-2000

   1. XIONG, Y. AND EICKBUSH, T.H.
   Origin and evolution of retroelements based upon their reverse transcriptase
   sequences. 
   EMBO J. 9 3353-3362 (1990). 

   2. RODGERS, D.W., GAMBLIN, S.J., HARRIS, B.A., RAY, S., CULP, J.S., 
   HELLMIG, B., WOOLF, D.J., DEBOUCK, C. AND HARRISON, S.C. 
   The structure of unliganded reverse transcriptase from the human
   immunodeficiency virus type 1.
   PROC.NATL.ACAD.SCI.U.S.A. 92(4) 1222-6 (1995).

   Reverse transcriptases occur in a variety of mobile elements, including
   retrotransposons, retroviruses, group II introns, bacterial msDNAs, 
   hepadnaviruses and caulimoviruses [1]. The enzyme catalyses RNA-template-
   directed extension of the 3'-end of DNA strands one deoxynucleotide at a 
   time; it cannot initiate a chain de novo, but requires an RNA or DNA primer,
   or DNA template.
  
   The structure of the unliganded reverse transcriptase (RT) from the human
   immunodeficiency virus type 1 has been solved to 3.2A resolution [2]. The
   enzyme is a heterodimer, with domains termed "fingers," "thumb," "palm," 
   and "connection" in both subunits, and a ribonuclease H domain in the
   larger subunit only [2]. Ligand binding has been shown to induce changes
   in the orientation of the thumb. A C-terminal domain common to a group
   of sequences from the C.elegans sequencing project is revealed by sequence
   analysis to share a high level of similarity with the RT small subunit.
  
   CERVTRCPTASE is a 10-element fingerprint that provides a signature for the
   C.elegans reverse-transcriptase-like proteins. The fingerprint was derived 
   from an initial alignment of 7 sequences: the motifs were drawn from
   conserved regions spanning the C-terminal half of the alignment. Three 
   iterations on SPTR37_10f were required to reach convergence, at which point
   a true set comprising 16 sequences was identified. Numerous partial matches
   were also found, almost all of which are related C.elegans reverse-
   transcriptase-like proteins that fail to match one or more motifs; the
   exception, Q9YGS2, is a reverse transcriptase-like protein from Fugu rubripes.

  SUMMARY INFORMATION
     16 codes involving 10 elements
      1 codes involving  9 elements
      0 codes involving  8 elements
      2 codes involving  7 elements
      2 codes involving  6 elements
      2 codes involving  5 elements
      3 codes involving  4 elements
      5 codes involving  3 elements
      7 codes involving  2 elements

   COMPOSITE FINGERPRINT INDEX
  
   10|  16   16   16   16   16   16   16   16   16   16  
    9|   1    1    1    1    1    1    1    1    1    0  
    8|   0    0    0    0    0    0    0    0    0    0  
    7|   1    1    1    2    2    2    2    1    1    1  
    6|   1    1    1    1    2    2    1    1    1    1  
    5|   0    0    0    0    0    2    2    2    2    2  
    4|   0    1    1    1    0    1    3    2    2    1  
    3|   0    2    0    2    0    1    2    3    2    3  
    2|   0    2    0    3    1    0    0    0    4    4  
   --+---------------------------------------------------
     |   1    2    3    4    5    6    7    8    9   10  

True positives..
 Q17506         Q17923         O16610         Q20175         
 P91391         O76601         Q20212         O16587         
 P91908         YMH5_CAEEL     Q19700         O17677         
 Q18781         O16615         O45631         O45796         
Subfamily:  Codes involving 9 elements
 Subfamily True positives..
 O44147         
Subfamily:  Codes involving 7 elements
 Subfamily True positives..
 O16440         Q22985         
Subfamily:  Codes involving 6 elements
 Subfamily True positives..
 YWV1_CAEEL     O17305         
Subfamily:  Codes involving 5 elements
 Subfamily True positives..
 Q21195         Q17805         
Subfamily:  Codes involving 4 elements
 Subfamily True positives..
 O16762         O17340         O17300         
Subfamily:  Codes involving 3 elements
 Subfamily True positives..
 O61863         Q94240         O01695         Q94254         
 O44722         
Subfamily:  Codes involving 2 elements
 Subfamily True positives..
 Q21670         Q22102         O61934         Q22959         
 P91062         YO84_CAEEL     Q9YGS2         


  PROTEIN TITLES
   Q17506           SIMILAR TO REVERSE TRANSCRIPTASE - CAENORHABDITIS ELEGANS.
   Q17923           SIMILARITY TO POL-LIKE REVERSE TRANSCIPTASE - CAENORHABDITIS
   O16610           C49D10.1 PROTEIN - CAENORHABDITIS ELEGANS.
   Q20175           SIMILAR TO REVERSE-TRANSCRIPTASE. NCBI GI: 1166581 - CAENORH
   P91391           SIMILAR TO REVERSE TRANSCRIPTASE - CAENORHABDITIS ELEGANS.
   O76601           H02F09.4 PROTEIN - CAENORHABDITIS ELEGANS.
   Q20212           F40F12.2 PROTEIN - CAENORHABDITIS ELEGANS.
   O16587           F21E9.1 PROTEIN - CAENORHABDITIS ELEGANS.
   P91908           M04C7.2 PROTEIN - CAENORHABDITIS ELEGANS.
   YMH5_CAEEL       HYPOTHETICAL 136.3 KD PROTEIN F58A4.5 IN CHROMOSOME III - CA
   Q19700           F22B3.3 PROTEIN - CAENORHABDITIS ELEGANS.
   O17677           C49A1.8 PROTEIN - CAENORHABDITIS ELEGANS.
   Q18781           SIMILAR TO REVERSE TRANSCRIPTASE - CAENORHABDITIS ELEGANS.
   O16615           B0281.2 PROTEIN - CAENORHABDITIS ELEGANS.
   O45631           K01G12.1 PROTEIN - CAENORHABDITIS ELEGANS.
   O45796           T19C9.7 PROTEIN - CAENORHABDITIS ELEGANS.
 
   O44147           C44B12.7 PROTEIN - CAENORHABDITIS ELEGANS.
 
   O16440           C02E7.14 PROTEIN - CAENORHABDITIS ELEGANS.
   Q22985           SIMILAR TO REVERSE TRANSCRIPTASE - CAENORHABDITIS ELEGANS.
 
   YWV1_CAEEL       HYPOTHETICAL 23.2 KD PROTEIN B0403.1 IN CHROMOSOME X - CAENO
   O17305           ZK250.1 PROTEIN - CAENORHABDITIS ELEGANS.
 
   Q21195           SIMILAR TO F58A4.5 - CAENORHABDITIS ELEGANS.
   Q17805           SIMILAR TO REVERSE TRANSCRIPTASE. NCBI GI: 1125798 - CAENORH
 
   O16762           F59E11.4 PROTEIN - CAENORHABDITIS ELEGANS.
   O17340           T23E7.3 PROTEIN - CAENORHABDITIS ELEGANS.
   O17300           ZK250.3 PROTEIN - CAENORHABDITIS ELEGANS.
 
   O61863           M01B12.1 PROTEIN - CAENORHABDITIS ELEGANS.
   Q94240           COSMID F55A4 - CAENORHABDITIS ELEGANS.
   O01695           COSMID T08B2 - CAENORHABDITIS ELEGANS.
   Q94254           SIMILAR TO TRANSPOSON REVERSE TRANSCRIPTASE - CAENORHABDITIS
   O44722           F49D11.5 PROTEIN - CAENORHABDITIS ELEGANS.
 
   Q21670           R03G8.2 PROTEIN - CAENORHABDITIS ELEGANS.
   Q22102           COSMID T02G5 - CAENORHABDITIS ELEGANS.
   O61934           R09A1.4 PROTEIN - CAENORHABDITIS ELEGANS.
   Q22959           COSMID F10G2 - CAENORHABDITIS ELEGANS.
   P91062           SIMILAR TO REVERSE TRANSCRIPTASE - CAENORHABDITIS ELEGANS.
   YO84_CAEEL       HYPOTHETICAL 42.2 KD PROTEIN ZK1236.4 IN CHROMOSOME III - CA
   Q9YGS2           REVERSE TRANSCRIPTASE-LIKE PROTEIN - FUGU RUBRIPES (JAPANESE

SCAN HISTORY SPTR37_10f 3 30 NSINGLE INITIAL MOTIF SETS CERVTRCPTASE1 Length of motif = 14 Motif number = 1 C.elegans reverse-transcriptase-like protein motif I - 1 PCODE ST INT VSAFADDLKLLGSD Q18781 167 167 VYAFADDIKLLGDN Q17923 44 44 VFAFADDLKAVGDN P91391 339 339 VTAFADDVKISSEN O45631 632 632 VSCFADDIKIFHHN YMH5_CAEEL 840 840 VSCFADDIKIYHHN Q20212 143 143 ISAFADDIKIYGDN Q20175 701 701 CERVTRCPTASE2 Length of motif = 16 Motif number = 2 C.elegans reverse-transcriptase-like protein motif II - 1 PCODE ST INT DPTSIQTSINIVADWC Q18781 180 -1 NVSAIQKSINVVTDWC Q17923 57 -1 NHQSIQESANIVARWC P91391 352 -1 NIESIKKSISIIEQWC O45631 645 -1 NPSTLQNSIDTIVKWS YMH5_CAEEL 853 -1 NPLIIQQSIDTIVSWS Q20212 156 -1 NSNSIQKSIDIVTDWC Q20175 714 -1 CERVTRCPTASE3 Length of motif = 17 Motif number = 3 C.elegans reverse-transcriptase-like protein motif III - 1 PCODE ST INT LNLAEQKTAVLHFGKKN Q18781 200 4 LNLAENKTNVIHFGKRN Q17923 77 4 LQLAENKSAVVHFGRSN P91391 372 4 LKLAENKTQVLHIGKLN O45631 665 4 LPLAPAKSSVLSLGSRN YMH5_CAEEL 873 4 LPLAPAKSSSLSLGSLN Q20212 176 4 LNLAENKSVVVHYGKNN Q20175 734 4 CERVTRCPTASE4 Length of motif = 24 Motif number = 4 C.elegans reverse-transcriptase-like protein motif IV - 1 PCODE ST INT YFVNSVEIKPRNSIRDLGVIVDTK Q18781 221 4 YYANGMKITKKDSVKDLGIFVDDK Q17923 98 4 YSINGVSIKKHNSFRDLGIVIDDN P91391 393 4 YLVNGHKISVCSKARDLGIWVDDK O45631 686 4 YRVDNVPILPSSTVRDLGLITDLK YMH5_CAEEL 894 4 YTVDGVPIIPSSTVRDLGLVTDPK Q20212 197 4 YTANGIIIAKKKSVKDLGIFVDDK Q20175 755 4 CERVTRCPTASE5 Length of motif = 19 Motif number = 5 C.elegans reverse-transcriptase-like protein motif V - 1 PCODE ST INT LSFVNHINQTSNSALLKCR Q18781 245 0 LNFQKHINIISNLALLKCR Q17923 122 0 LKFEKDIISISNAALLKCR P91391 417 0 LAFDKHIHLIVNSAIFKSR O45631 710 0 LNFEPHIIKISCLAMLRAK YMH5_CAEEL 918 0 LKFEAHIAKISSLAMLRAK Q20212 221 0 LNFHGHITYLTNAALLKCR Q20175 779 0 CERVTRCPTASE6 Length of motif = 18 Motif number = 6 C.elegans reverse-transcriptase-like protein motif VI - 1 PCODE ST INT QILRSFRSKSPEFYFKLF Q18781 264 0 QLLRSFRSKNASLYFKLY Q17923 141 0 QLLRSFQTSNAQFYFKLY P91391 436 0 QILKTFRSTNALFYFKLF O45631 729 0 KILKAFSSNSHKFYSHIF YMH5_CAEEL 937 0 QILKAFSSNSPHFYGFLF Q20212 240 0 QLLKAFRSTNASLYFKLY Q20175 798 0 CERVTRCPTASE7 Length of motif = 18 Motif number = 7 C.elegans reverse-transcriptase-like protein motif VII - 1 PCODE ST INT FNVYIRPVLEYGCELFPP Q18781 281 -1 YNIYVQPILNYGCEIYNP Q17923 158 -1 YNTYVRPILEYGCEIFHP P91391 453 -1 FNIYVRPILEFGCEVFNP O45631 746 -1 FKTYVAPIINYCSEIYSP YMH5_CAEEL 954 -1 FKTYVAPIINYCAEVYSP Q20212 257 -1 YNIYVQPILDYGCEIYSP Q20175 815 -1 CERVTRCPTASE8 Length of motif = 11 Motif number = 8 C.elegans reverse-transcriptase-like protein motif VIII - 1 PCODE ST INT PESPLRFFSNS Q18781 307 8 LESPLKFFSRR Q17923 184 8 LESPLRFFSRK P91391 479 8 LEKPQRYFSRL O45631 772 8 LEKPLRTFTKR YMH5_CAEEL 981 9 LEKPLRHFTKR Q20212 284 9 LEKPLRFFTRR Q20175 841 8 CERVTRCPTASE9 Length of motif = 20 Motif number = 9 C.elegans reverse-transcriptase-like protein motif IX - 1 PCODE ST INT RLSQFNLLSTHHRRVLQILR Q18781 318 0 RLAQLNQKSVQHLRILQILR Q17923 209 14 RLSQFELKSTLHRRLLMILK P91391 504 14 RLIQVNQTTLKHHRLLLIAK O45631 797 14 RLCIMELFSTRHTRIKAQMK YMH5_CAEEL 1006 14 RLSIMKLFSTRHTRIKAQMK Q20212 309 14 RLAQANLKSVQHRRVLQILR Q20175 866 14 CERVTRCPTASE10 Length of motif = 14 Motif number = 10 C.elegans reverse-transcriptase-like protein motif X - 1 PCODE ST INT RTFHKIISSEYHFP Q18781 337 -1 RTYHNILSGSFKLF Q17923 228 -1 KTFYNIVTKSYHFP P91391 523 -1 KTYHDIVTGTRHFP O45631 816 -1 KLLYRLLTGSTHFS YMH5_CAEEL 1025 -1 KLLYRFLTGSSHFP Q20212 328 -1 RTYHNIITGNFHYP Q20175 885 -1 FINAL MOTIF SETS CERVTRCPTASE1 Length of motif = 14 Motif number = 1 C.elegans reverse-transcriptase-like protein motif I - 3 PCODE ST INT VYAFADDIKLLGDN Q17506 570 570 VYAFADDIKLLGDN Q17923 44 44 VFAFADDLKVVGDN O16610 493 493 ISAFADDIKIYGDN Q20175 701 701 VFAFADDLKAVGDN P91391 339 339 VTAFADDIKILGDN O76601 877 877 VSCFADDIKIYHHN Q20212 143 143 ISCFADDVKIFHTD O16587 909 909 ISCFANDVKIFHTD P91908 434 434 VSCFADDIKIFHHN YMH5_CAEEL 840 840 FSCFADDIKLFGHS Q19700 326 326 FSCFADDIKLFGHS O17677 326 326 VSAFADDLKLLGSD Q18781 167 167 VSCYADDIKIYGPS O16615 114 114 VTAFADDVKISSEN O45631 632 632 AMAFADDLKLFSNN O45796 958 958 CERVTRCPTASE2 Length of motif = 16 Motif number = 2 C.elegans reverse-transcriptase-like protein motif II - 3 PCODE ST INT NVSAIQKSINVVTDWC Q17506 583 -1 NVSAIQKSINVVTDWC Q17923 57 -1 NHQSIQESANIVARWC O16610 506 -1 NSNSIQKSIDIVTDWC Q20175 714 -1 NHQSIQESANIVARWC P91391 352 -1 NSTAIQRAIDIVTEWC O76601 890 -1 NPLIIQQSIDTIVSWS Q20212 156 -1 DPTIIQNSIDIIVSWS O16587 922 -1 DPTIIQNSIDIIVSWS P91908 447 -1 NPSTLQNSIDTIVKWS YMH5_CAEEL 853 -1 SPSELQAAIDLIANWS Q19700 339 -1 SPSELQAAIDLIANWS O17677 339 -1 DPTSIQTSINIVADWC Q18781 180 -1 SASDLQSTIDQIATWS O16615 127 -1 NIESIKKSISIIEQWC O45631 645 -1 NCKSLKSSISLIEAWC O45796 971 -1 CERVTRCPTASE3 Length of motif = 17 Motif number = 3 C.elegans reverse-transcriptase-like protein motif III - 3 PCODE ST INT LNLAENKTNVIHFGKRN Q17506 603 4 LNLAENKTNVIHFGKRN Q17923 77 4 LQLAENKSAVVHFGRNN O16610 526 4 LNLAENKSVVVHYGKNN Q20175 734 4 LQLAENKSAVVHFGRSN P91391 372 4 LNLAENKTNVVHLGNKN O76601 910 4 LPLAPAKSSSLSLGSLN Q20212 176 4 LPLAPTKSALLALGTRN O16587 942 4 LPLAPTKSALLALGTRN P91908 467 4 LPLAPAKSSVLSLGSRN YMH5_CAEEL 873 4 LPLAPAKTALLQLGKKN Q19700 359 4 LPLAPAKTALLQLGKKN O17677 359 4 LNLAEQKTAVLHFGKKN Q18781 200 4 LPLAPAKTSLLHLGPLN O16615 147 4 LKLAENKTQVLHIGKLN O45631 665 4 LNLAENKTNVLHIGKKN O45796 991 4 CERVTRCPTASE4 Length of motif = 24 Motif number = 4 C.elegans reverse-transcriptase-like protein motif IV - 3 PCODE ST INT YYANGMKVTKKDSVKDLGIFVDDK Q17506 624 4 YYANGMKITKKDSVKDLGIFVDDK Q17923 98 4 YSINGVSIRKHNSFSDLGIVIDDN O16610 547 4 YTANGIIIAKKKSVKDLGIFVDDK Q20175 755 4 YSINGVSIKKHNSFRDLGIVIDDN P91391 393 4 YFANGIQISEKDSVKDLGVFVDNK O76601 931 4 YTVDGVPIIPSSTVRDLGLVTDPK Q20212 197 4 YSVDGVPITPSSTVRDLGLITDCK O16587 963 4 YSVDGVPITPSSTVRDLGLITDCK P91908 488 4 YRVDNVPILPSSTVRDLGLITDLK YMH5_CAEEL 894 4 YTVDNITVSPTNSVRDLGLYTDSK Q19700 380 4 YTVDNITVSPTNSVRDLGLYTDSK O17677 380 4 YFVNSVEIKPRNSIRDLGVIVDTK Q18781 221 4 FTVDNIPVLPSSSVRDLGLLTDDK O16615 168 4 YLVNGHKISVCSKARDLGIWVDDK O45631 686 4 YYVNGQKIHSCSKARDLGIWIDDR O45796 1012 4 CERVTRCPTASE5 Length of motif = 19 Motif number = 5 C.elegans reverse-transcriptase-like protein motif V - 3 PCODE ST INT LNFQKHINIISNLALLKCR Q17506 648 0 LNFQKHINIISNLALLKCR Q17923 122 0 LKFEKHIISISNAALLKCR O16610 571 0 LNFHGHITYLTNAALLKCR Q20175 779 0 LKFEKDIISISNAALLKCR P91391 417 0 LNFKKHINYISNCALLECK O76601 955 0 LKFEAHIAKISSLAMLRAK Q20212 221 0 LKFEHHIVKVSCLAMLRSK O16587 987 0 LKFEHHIVKVSCLAMLRSK P91908 512 0 LNFEPHIIKISCLAMLRAK YMH5_CAEEL 918 0 LTFQPHINRATSLALLRAK Q19700 404 0 LTFKPHINRATSLALLRAK O17677 404 0 LSFVNHINQTSNSALLKCR Q18781 245 0 LTFKSHINRISSLALLRSK O16615 192 0 LAFDKHIHLIVNSAIFKSR O45631 710 0 LAYDKHIIIKVNAAMFKCR O45796 1036 0 CERVTRCPTASE6 Length of motif = 18 Motif number = 6 C.elegans reverse-transcriptase-like protein motif VI - 3 PCODE ST INT QLLRSFRSTNVSLYFKLY Q17506 667 0 QLLRSFRSKNASLYFKLY Q17923 141 0 QLLRSFQSSNAQFYFKLY O16610 590 0 QLLKAFRSTNASLYFKLY Q20175 798 0 QLLRSFQTSNAQFYFKLY P91391 436 0 QLLKSFRSTNANLYFKLF O76601 974 0 QILKAFSSNSPHFYGFLF Q20212 240 0 QILKAFSSNSPKFYAHLY O16587 1006 0 QILKAFSSNSPKFYAHLY P91908 531 0 KILKAFSSNSHKFYSHIF YMH5_CAEEL 937 0 QILKCFSSSSPKFYISMY Q19700 423 0 QILKCFSSSSPKFYINMY O17677 423 0 QILRSFRSKSPEFYFKLF Q18781 264 0 QILKSFSSTSPEFYVNLY O16615 211 0 QILKTFRSTNALFYFKLF O45631 729 0 QILKNFQSLNMPFYFKLF O45796 1055 0 CERVTRCPTASE7 Length of motif = 18 Motif number = 7 C.elegans reverse-transcriptase-like protein motif VII - 3 PCODE ST INT YNIYVQPILNYGCEIYNP Q17506 684 -1 YNIYVQPILNYGCEIYNP Q17923 158 -1 YNTYVRPILEYGCEIFHP O16610 607 -1 YNIYVQPILDYGCEIYSP Q20175 815 -1 YNTYVRPILEYGCEIFHP P91391 453 -1 FNVYVQPLLNYGSEVFSP O76601 991 -1 FKTYVAPIINYCAEVYSP Q20212 257 -1 YKTYVAPIMNYCSEVYAP O16587 1023 -1 YKTYVAPIMNYCSEVYAP P91908 548 -1 FKTYVAPIINYCSEIYSP YMH5_CAEEL 954 -1 YKTYVSPILEYGSVIYSP Q19700 440 -1 YKTYVSPILEYGSVIYSP O17677 440 -1 FNVYIRPVLEYGCELFPP Q18781 281 -1 YKLYVSPILEYCSVVFSP O16615 228 -1 FNIYVRPILEFGCEVFNP O45631 746 -1 FNIYIRPILEYGCEIYHP O45796 1072 -1 CERVTRCPTASE8 Length of motif = 11 Motif number = 8 C.elegans reverse-transcriptase-like protein motif VIII - 3 PCODE ST INT LESPLKFFSRR Q17506 710 8 LESPLKFFSRR Q17923 184 8 LESPLRFFSRK O16610 633 8 LEKPLRFFTRR Q20175 841 8 LESPLRFFSRK P91391 479 8 LEMPLKFYSRR O76601 1017 8 LEKPLRHFTKR Q20212 284 9 LEQPLRHFTKR O16587 1050 9 LEQPLRHFTKR P91908 575 9 LEKPLRTFTKR YMH5_CAEEL 981 9 LESPLKYFSKR Q19700 467 9 LESLLKYFSKR O17677 467 9 PESPLRFFSNS Q18781 307 8 LESPLQYYSKR O16615 255 9 LEKPQRYFSRL O45631 772 8 LEQPLRFYSRH O45796 1098 8 CERVTRCPTASE9 Length of motif = 20 Motif number = 9 C.elegans reverse-transcriptase-like protein motif IX - 3 PCODE ST INT RLAQMNQKSVQHLRILQILR Q17506 735 14 RLAQLNQKSVQHLRILQILR Q17923 209 14 RLSQFELKSTLHRRLLMILK O16610 658 14 RLAQANLKSVQHRRVLQILR Q20175 866 14 RLSQFELKSTLHRRLLMILK P91391 504 14 RLAQMNQKSVQHLRILQILR O76601 1042 14 RLSIMKLFSTRHTRIKAQMK Q20212 309 14 RLSIMELHSTRHNRIKAQLK O16587 1075 14 RLSIMELHSTRHNRIKAKLK P91908 600 14 RLCIMELFSTRHTRIKAQMK YMH5_CAEEL 1006 14 RLKILGISSARSLRLRAQLL Q19700 505 27 RLKILGISSARSLRLRAQLL O17677 505 27 RLSQFNLLSTHHRRVLQILR Q18781 318 0 RIQILNIQTARSLRLKAQLL O16615 293 27 RLIQVNQTTLKHHRLLLIAK O45631 797 14 RLIQADQSSLEHRRILLILK O45796 1123 14 CERVTRCPTASE10 Length of motif = 14 Motif number = 10 C.elegans reverse-transcriptase-like protein motif X - 3 PCODE ST INT RTYHNILSGEYHFP Q17506 754 -1 RTYHNILSGSFKLF Q17923 228 -1 KTFYNIVTKSYHFP O16610 677 -1 RTYHNIITGNFHYP Q20175 885 -1 KTFYNIVTKSYHFP P91391 523 -1 RTFHNIVSGEYHFP O76601 1061 -1 KLLYRFLTGSSHFP Q20212 328 -1 KVLYRLLTGTSHFS O16587 1094 -1 KLLYRLLTGTSHFS P91908 619 -1 KLLYRLLTGSTHFS YMH5_CAEEL 1025 -1 LLLYKILTGAAHFP Q19700 524 -1 LLLYKILTGAAHFP O17677 524 -1 RTFHKIISSEYHFP Q18781 337 -1 LLLYNILTGTAYFP O16615 312 -1 KTYHDIVTGTRHFP O45631 816 -1 KTFHNIITGKYYFH O45796 1142 -1

User query: Display/Full Code "CERVTRCPTASE"