WORKLIST ENTRIES (1):

HOMEOBOX View alignment View Structure        Homeobox signature
 Type of fingerprint: COMPOUND with 3  elements
Links:
   PRINTS; PR00025 ANTENNAPEDIA; PR00026 ENGRAILED; PR00027 PAIREDBOX
   PRINTS; PR00028 POUDOMAIN; PR00029 OCTAMER; PR00030 HTHCRO 
   PRINTS; PR00031 HTHREPRESSR
   INTERPRO; IPR001356
   PROSITE; PS00027 HOMEOBOX
   PFAM; PF00046 homeobox

 Creation date 05-JUN-1993; UPDATE 20-JUN-1999

   1. GEHRING, W.J.
   The homeobox in perspective.
   TRENDS BIOCHEM.SCI. 17 277-280 (1992).

   2. SCOTT, M.P., TAMKUN, J.W. AND HARTZEL, G.W.
   The structure and function of the homeodomain.
   BIOCHIM.BIOPHYS.ACTA 989 25-48 (1989).

   3. SCHOFIELD, P.N.
   Patterns, puzzles and pardigms - The riddle of the homeobox.
   TRENDS NEUROSCI. 10 3-6 (1987).

   The homeobox is a 60-residue motif first identified in a number of
   Drosophila homeotic and segmentation proteins, but now known to be well-
   conserved in many other animals, including vertebrates [1-3]. Proteins
   containing homeobox domains are likely to play an important role in
   development - most are known to be sequence-specific DNA-binding
   transcription factors. The domain binds DNA through a helix-turn-helix
   (HTH) structure.
  
   The HTH motif is characterised by 2 alpha-helices, which make intimate 
   contacts with the DNA and are joined by a short turn. The second helix 
   binds to DNA via a number of hydrogen bonds and hydrophobic interactions, 
   which occur between specific side chains and the exposed bases and thymine 
   methyl groups within the major groove of the DNA [3]. The first helix helps
   to stabilise the structure [4]. The motif is very similar in sequence and 
   structure in a wide range of DNA-binding proteins (e.g., cro and repressor 
   proteins, homeotic proteins, etc.). One of the principal differences 
   between HTH motifs in these different proteins arises from the stereo-
   chemical requirement for glycine in the turn (position 9 of the motif), 
   which is needed to avoid steric interference of the beta-carbon with the 
   main chain: for cro and repressor proteins the glycine appears to be 
   mandatory, while for many of the homeotic and other DNA-binding proteins
   the requirement is relaxed. 
  
   HOMEOBOX is a 3-element fingerprint that provides a signature for the 
   homeobox domain. The fingerprint was derived from an initial alignment of
   10 sequences: the motifs span the HTH motif, motif 2 including position 9,
   which is frequently Cys rather than Gly (cf. PROSITE pattern HOMEOBOX
   (PS00027)). Seven iterations on OWL20.0 were required to reach convergence,
   at which point a true set comprising 342 sequences was identified. A subset
   of 48 partial matches was also found, most of which are fragments - the
   remaining partial matches are regarded as noise. This apparently poor
   discrimination results from the use of only 3 motifs, which compromises
   discrimination power.
  
   An update on SPTR37_9f identified a true set of 458 sequences, and 127
   partial matches.

  SUMMARY INFORMATION
    458 codes involving  3 elements
    127 codes involving  2 elements

   COMPOSITE FINGERPRINT INDEX
  
    3| 458  458  458  
    2|  23  119  112  
   --+----------------
     |   1    2    3  

True positives..
 HMB1_STRPU     HB7A_XENLA     HB7B_XENLA     HMAN_DROME     
 HXA7_HUMAN     HXA7_MOUSE     HXA7_XENLA     HXB6_BRARE     
 HXB6_HUMAN     HXB6_MOUSE     HXB7_HUMAN     HXB7_MOUSE     
 HXC6_HUMAN     HXC6_MOUSE     HXC6_SHEEP     HXC6_XENLA     
 O42504         O43368         O76760         O76761         
 Q17188         Q24508         Q24645         Q25213         
 Q26469         Q64078         Q64081         SCR_DROME      
 O43366         HXA4_MOUSE     HXA4_HUMAN     HXA4_CHICK     
 O18313         O76939         O76937         HXA7_COTJA     
 O43367         HXD4_MOUSE     HXD4_HUMAN     HXD4_CHICK     
 HXC4_MOUSE     HXC4_HUMAN     HXB5_MOUSE     HXB5_HUMAN     
 HXB5_BRARE     HXA5_MOUSE     HXA5_HUMAN     Q64082         
 HXD8_CHICK     HXC8_MOUSE     HXB8_MOUSE     Q26445         
 HMDF_DROME     P92161         HXC5_MOUSE     HXC5_HUMAN     
 HXC5_BRARE     HXB4_CHICK     O13074         HXB4_MOUSE     
 HXB4_HUMAN     Q26868         HXB4_XENLA     O42503         
 O76762         HMAA_DROME     HMLA_DROME     HXD8_MOUSE     
 O46127         Q24782         HMZ2_DROME     HXC6_NOTVI     
 O57374         O61575         HXA9_HUMAN     HXC9_MOUSE     
 HXD9_HUMAN     HXD9_MOUSE     O43369         O43429         
 O70154         O75805         O75806         Q60499         
 Q64083         O76842         O42502         Q23990         
 HOX3_BRAFL     Q99955         Q64084         O93353         
 O43365         O42506         HXD3_MOUSE     HXD3_HUMAN     
 HXA3_MOUSE     HMUX_DROME     O76759         O76758         
 O44269         HXA1_HUMAN     HXA1_MOUSE     O43363         
 HMPB_DROME     Q25679         P91714         HXB1_CHICK     
 Q25131         MAB5_CAEEL     HB9_HUMAN      HXA2_CHICK     
 HXA2_MOUSE     HXA2_RAT       HXB2_HUMAN     O43364         
 O93365         HXB1_HUMAN     HXB1_MOUSE     O42139         
 O62523         LI39_CAEEL     HXB9_MOUSE     HXB9_XENLA     
 HXA1_BRARE     HXB3_MOUSE     HXB3_HUMAN     HXB3_CHICK     
 O44936         Q25182         O17476         HXB1_CYPCA     
 O13073         HXD1_MOUSE     HXD1_XENLA     Q91767         
 MOX2_HUMAN     MOX2_MOUSE     MOX2_RAT       MOX2_XENLA     
 HM8_XENLA      IPF1_HUMAN     IPF1_MESAU     IPF1_MOUSE     
 IPF1_RAT       O60594         HMZ1_DROSU     HMZ1_DROME     
 Q19937         O93290         GSHI_MOUSE     GSH2_MOUSE     
 Q25144         Q26381         O73726         O76938         
 Q04787         HMBP_DROME     HMMC_BRARE     HMX2_CHICK     
 HMX2_COTJA     HMX2_MOUSE     O44937         P70061         
 O93590         O13090         HK32_MOUSE     MOX1_HUMAN     
 MOX1_MOUSE     O13091         HK31_MOUSE     HK31_HUMAN     
 Q25186         HXCA_MOUSE     HMMA_BRARE     HMX1_BOVIN     
 HMX1_CHICK     HMX1_HUMAN     HMX1_MOUSE     HMXX_CHICK     
 MSX3_MOUSE     Q90235         Q90455         HMSH_DROME     
 Q24481         YRN1_CAEEL     O70218         HXDA_HUMAN     
 HXDA_MOUSE     HMRO_DROME     Q24487         HMMD_BRARE     
 Q90853         O88699         O57601         HK51_MOUSE     
 Q90469         Q24780         O43605         O43370         
 HXAA_MOUSE     HXAA_HUMAN     HMN1_DROME     SAX1_MOUSE     
 HK23_MOUSE     Q98871         Q91863         Q91862         
 Q91861         Q91623         O73907         O61286         
 HMFT_DROME     HK26_MOUSE     O42505         HMDL_BRAFL     
 HMDL_DROME     Q91964         DLX2_BRARE     DLX5_BRARE     
 DLX2_MOUSE     DLX2_HUMAN     O76848         HMFT_DROHY     
 HMRO_DROVI     Q21169         DLX3_AMBME     DLX3_BRARE     
 DLX3_HUMAN     DLX3_MOUSE     DLX3_NOTVI     DLX3_PLEWA     
 HMD2_XENLA     Q98873         HK25_MOUSE     HK25_HUMAN     
 Q18532         HMAB_DROME     HK25_CHICK     Q98872         
 O13160         HK25_XENLA     HMX2_HUMAN     O13005         
 O13053         HM16_CAEEL     O35767         Q26371         
 HMEN_DROVI     HMEN_DROME     HMD1_CHICK     Q91622         
 Q91152         CDX4_MOUSE     Q90262         Q90320         
 HMEN_BOMMO     HMIN_BOMMO     DLX4_BRARE     DLX1_BRARE     
 DLX6_BRARE     DLX1_MOUSE     DLX5_CHICK     HMD3_XENLA     
 DLX5_RAT       DLX5_MOUSE     GBX2_CHICK     GBX2_HUMAN     
 GBX2_MOUSE     GBX2_XENLA     Q24136         H114_BRARE     
 HMIN_DROME     CDX1_HUMAN     CDX1_MOUSE     Q25212         
 O61640         O15522         O70584         HME3_BRARE     
 HMEN_ANOGA     HME2_BRARE     HMED_XENLA     HME2_CHICK     
 Q26449         HMEN_ARTSF     CDX4_HUMAN     Q91926         
 Q26451         HMD4_XENLA     P90688         HME2_HUMAN     
 HMEC_XENLA     HME2_MOUSE     CDX2_HUMAN     Q17243         
 P79788         CDX2_MESAU     O13023         HMPH_MOUSE     
 HMPH_HUMAN     HMPH_CHICK     Q26601         CDX2_MOUSE     
 O42173         YZQ6_CAEEL     HMTI_DROME     Q24787         
 HMCA_DROME     Q21578         DLX7_MOUSE     O16132         
 HMH2_DUGTI     Q90481         O77158         HNK2_XENLA     
 HK22_MOUSE     HK22_MESAU     DLX7_BRARE     DLX8_BRARE     
 Q98863         HX3_XENLA      EVX2_MOUSE     EVX1_MOUSE     
 EVX1_HUMAN     HMD1_CAEEL     Q26436         HMN2_DROME     
 Q90265         Q91542         Q24781         HMD1_XENLA     
 Q91914         HMEV_DROME     P92067         O01353         
 Q91669         Q91893         Q91878         Q91877         
 O14954         TTF1_RAT       TTF1_MOUSE     TTF1_HUMAN     
 TTF1_CANFA     O14955         HME1_HUMAN     HME1_MOUSE     
 Q93793         O17319         O17318         O77058         
 HM22_CAEEL     HOX1_HALRO     O18325         O35762         
 Q60554         P78426         Q24255         Q23838         
 HME1_CHICK     O08686         O43518         HME1_BRARE     
 HMH1_DUGTI     HMH2_DROME     HLX1_HUMAN     HLX1_MOUSE     
 P70159         P91626         Q21061         EGL5_CAEEL     
 Q26604         P91625         O88181         Q24256         
 Q24257         YL15_CAEEL     VAB7_CAEEL     LBX1_MOUSE     
 LBX1_HUMAN     O09113         O42115         O35085         
 HM1D_DROAN     P79738         ANF1_CHICK     P79681         
 ANF1_XENLA     ANF2_XENLA     Q24357         O93367         
 O93366         O55144         O43711         HX11_MOUSE     
 HX11_HUMAN     O43763         Q61663         DBX_MOUSE      
 O76971         O00412         O00413         O15266         
 O15267         O35749         O35750         O60465         
 O60902         O60903         O73678         P70390         
 HM30_CAEEL     Q24477         Q62798         O62545         
 O14813         O35690         Q62066         Q62782         
 Q99453         Q06453         O18400         O60578         
 O60579         O60580         O70336         O75364         
 O93385         O93396         PIX2_HUMAN     PIX2_MOUSE     
 PIX3_MOUSE     Q21836         PIX1_HUMAN     PIX1_MOUSE     
 O01874         PIX3_RAT       UN30_CAEEL     Q06348         
 HMOC_DROME     O45024         O46033         O46169         
 O46170         O61282         O93488         O93489         
 OTX1_BRARE     OTX1_HUMAN     OTX1_MOUSE     OTX1_RAT       
 OTX2_BRARE     OTX2_HUMAN     OTX2_MOUSE     OTX2_XENLA     
 OTX3_BRARE     OTX_STRPU      
Subfamily:  Codes involving 2 elements
 Subfamily True positives..
 HXAB_CHICK     HXDB_NOTVI     HXDB_MOUSE     HXDB_CHICK     
 HXCB_HUMAN     HXAB_MOUSE     O08656         Q90470         
 Q90263         Q90264         P92042         Q18513         
 PAL1_CAEEL     O88880         O93528         HMES_DROME     
 YRM6_CAEEL     Q06615         Q91770         HXDC_CHICK     
 HXDC_MOUSE     Q91967         HXDC_BRARE     Q90461         
 O17588         O93287         HEX1_MOUSE     HXAD_HUMAN     
 HXAD_MOUSE     HXDD_BRARE     HXDD_MOUSE     HXDD_HUMAN     
 HXDD_CHICK     Q98911         HM23_CAEEL     O46118         
 O54817         O88933         HXBD_HUMAN     HXBD_MOUSE     
 O35137         O70137         O93582         Q60535         
 CRT1_HUMAN     CRT1_XENLA     CRT1_RAT       HPR1_CHICK     
 Q91368         PMX1_MOUSE     O60807         UNC4_CAEEL     
 P97830         O08934         Q20455         O93534         
 O57407         O46035         O42567         O42566         
 O42358         O42357         O42201         O35602         
 O08748         O93407         O73867         MIX2_XENLA     
 MIX1_XENLA     Q22459         HAT1_ARATH     PRH1_MOUSE     
 PRH1_HUMAN     HM08_CAEEL     O93536         HGL2_ARATH     
 Q39948         O23208         O15499         ATH5_ARATH     
 Q43427         CRX_MOUSE      CRX_HUMAN      HAT9_ARATH     
 Q42437         O82763         O65769         HT22_ARATH     
 Q40782         Q40781         Q40780         ATH4_ARATH     
 Q43425         Q39862         HAT4_ARATH     HAT7_ARATH     
 Q43529         Q43428         Q43426         Q39941         
 O65770         Q39927         HAT5_ARATH     ATH6_ARATH     
 P93041         ATH7_ARATH     HOY1_YARLI     O77238         
 O04554         O43812         O18381         GSBD_DROME     
 O01996         O42349         PAX7_HUMAN     O57420         
 O57419         O57418         P91739         HMPR_DROME     
 Q12785         PAX3_MOUSE     PAX3_HUMAN     O57416         
 O17978         GSBP_DROME     Q14333         


  PROTEIN TITLES
   HMB1_STRPU       HOMEOBOX PROTEIN HB1 (SPHBOX1) - STRONGYLOCENTROTUS PURPURAT
   HB7A_XENLA       HOMEOBOX PROTEIN HOX-B7 A (XLHBOX-2 A) (MM3) - XENOPUS LAEVI
   HB7B_XENLA       HOMEOBOX PROTEIN HOX-B7 B (XLHBOX-2 B) (P52) - XENOPUS LAEVI
   HMAN_DROME       HOMEOTIC ANTENNAPEDIA PROTEIN - DROSOPHILA MELANOGASTER (FRU
   HXA7_HUMAN       HOMEOBOX PROTEIN HOX-A7 (HOX-1A) - HOMO SAPIENS (HUMAN).
   HXA7_MOUSE       HOMEOBOX PROTEIN HOX-A7 (HOX-1.1) (M6-12) (M6) - MUS MUSCULU
   HXA7_XENLA       HOMEOBOX PROTEIN HOX-A7 (HLHBOX-3) (XHOX-36) - XENOPUS LAEVI
   HXB6_BRARE       HOMEOBOX PROTEIN HOX-B6 (ZF-22) - BRACHYDANIO RERIO (ZEBRAFI
   HXB6_HUMAN       HOMEOBOX PROTEIN HOX-B6 (HOX-2B) (HOX-2.2) (HU-2) - HOMO SAP
   HXB6_MOUSE       HOMEOBOX PROTEIN HOX-B6 (HOX-2.2) (MH-22A) - MUS MUSCULUS (M
   HXB7_HUMAN       HOMEOBOX PROTEIN HOX-B7 (HOX-2C) (HHO.C1) - HOMO SAPIENS (HU
   HXB7_MOUSE       HOMEOBOX PROTEIN HOX-B7 (HOX-2.3) (MUB1) (MH-22B) - MUS MUSC
   HXC6_HUMAN       HOMEOBOX PROTEIN HOX-C6 (HOX-3C) (HHO.C8) (CP25) - HOMO SAPI
   HXC6_MOUSE       HOMEOBOX PROTEIN HOX-C6 (HOX-3.3) (HOX-6.1) - MUS MUSCULUS (
   HXC6_SHEEP       HOMEOBOX PROTEIN HOX-C6 - OVIS ARIES (SHEEP).
   HXC6_XENLA       HOMEOBOX PROTEIN HOX-C6 (XLHBOX-1) (AC1) - XENOPUS LAEVIS (A
   O42504           HOMEOBOX PROTEIN HOXC-6 - FUGU RUBRIPES (JAPANESE PUFFERFISH
   O43368           HOMEOBOX PROTEIN HOX-A7 (HOX-1A) - HOMO SAPIENS (HUMAN).
   O76760           SEX COMBS REDUCED HOMEOTIC PROTEIN - ANOPHELES GAMBIAE (AFRI
   O76761           ANTENNAPEDIA HOMEOTIC PROTEIN - ANOPHELES GAMBIAE (AFRICAN M
   Q17188           ANTENNAPEDIA HOMOLOGUE PROTEIN - BOMBYX MORI (SILK MOTH).
   Q24508           SCR GENE EXON1 - DROSOPHILA MELANOGASTER (FRUIT FLY).
   Q24645           ANTENNAPEDIA HOMEOTIC GENE (ANTP), EXONS 4-7 - DROSOPHILA SU
   Q25213           ABDOMINAL-A HOMEODOMAIN PROTEIN - JUNONIA COENIA (PEACOCK BU
   Q26469           HOMEOTIC PROTEIN - SCHISTOCERCA AMERICANA (AMERICAN GRASSHOP
   Q64078           HOX-A|HOX-1 {CLONE 29A} - RATTUS NORVEGICUS (RAT).
   Q64081           HOX-B|HOX-2 {CLONE 17A} - RATTUS NORVEGICUS (RAT).
   SCR_DROME        HOMEOTIC SEX COMBS REDUCED PROTEIN - DROSOPHILA MELANOGASTER
   O43366           HOMEOBOX PROTEIN HOX-A4 (HOX-1D) (HOX-1.4) - HOMO SAPIENS (H
   HXA4_MOUSE       HOMEOBOX PROTEIN HOX-A4 (HOX-1.4) (MH-3) - MUS MUSCULUS (MOU
   HXA4_HUMAN       HOMEOBOX PROTEIN HOX-A4 (HOX-1D) (HOX-1.4) - HOMO SAPIENS (H
   HXA4_CHICK       HOMEOBOX PROTEIN HOX-A4 (CHOX-1.4) - GALLUS GALLUS (CHICKEN)
   O18313           HOX 5 - CIONA INTESTINALIS.
   O76939           DTHOXE PROTEIN - DUGESIA TIGRINA (PLANARIAN).
   O76937           HOMEODOMAIN PROTEIN - DUGESIA TIGRINA (PLANARIAN).
   HXA7_COTJA       HOMEOBOX PROTEIN HOX-A7 (QUOX-1) - COTURNIX COTURNIX JAPONIC
   O43367           HOMEOBOX PROTEIN HOX-A5 (HOX-1C) - HOMO SAPIENS (HUMAN).
   HXD4_MOUSE       HOMEOBOX PROTEIN HOX-D4 (HOX-4.2) (HOX-5.1) - MUS MUSCULUS (
   HXD4_HUMAN       HOMEOBOX PROTEIN HOX-D4 (HOX-4B) (HOX-5.1) (HHO.C13) - HOMO 
   HXD4_CHICK       HOMEOBOX PROTEIN HOX-D4 (CHOX-A) - GALLUS GALLUS (CHICKEN).
   HXC4_MOUSE       HOMEOBOX PROTEIN HOX-C4 (HOX-3.5) - MUS MUSCULUS (MOUSE).
   HXC4_HUMAN       HOMEOBOX PROTEIN HOX-C4 (HOX-3E) (CP19) - HOMO SAPIENS (HUMA
   HXB5_MOUSE       HOMEOBOX PROTEIN HOX-B5 (HOX-2.1) (MU-1) (H24.1) - MUS MUSCU
   HXB5_HUMAN       HOMEOBOX PROTEIN HOX-B5 (HOX-2A) (HHO.C10) (HU-1) - HOMO SAP
   HXB5_BRARE       HOMEOBOX PROTEIN HOX-B5 (ZF-21) - BRACHYDANIO RERIO (ZEBRAFI
   HXA5_MOUSE       HOMEOBOX PROTEIN HOX-A5 (HOX-1.3) (M2) - MUS MUSCULUS (MOUSE
   HXA5_HUMAN       HOMEOBOX PROTEIN HOX-A5 (HOX-1C) - HOMO SAPIENS (HUMAN).
   Q64082           HOX-B|HOX-2 {CLONE 17B} - RATTUS NORVEGICUS (RAT).
   HXD8_CHICK       HOMEOBOX PROTEIN HOX-D8 (CHOX-M) - GALLUS GALLUS (CHICKEN).
   HXC8_MOUSE       HOMEOBOX PROTEIN HOX-C8 (HOX-3.1) (M31) - MUS MUSCULUS (MOUS
   HXB8_MOUSE       HOMEOBOX PROTEIN HOX-B8 (HOX-2.4) - MUS MUSCULUS (MOUSE).
   Q26445           LOX4=ULTRABITHORAX/ABDOMINAL-A HOMOLOG - HIRUDO MEDICINALIS 
   HMDF_DROME       HOMEOTIC DEFORMED PROTEIN - DROSOPHILA MELANOGASTER (FRUIT F
   P92161           TRANSCRIPTION FACTOR DEFORMED (TC DEFORMED) - TRIBOLIUM CAST
   HXC5_MOUSE       HOMEOBOX PROTEIN HOX-C5 (HOX-3.4) (HOX-6.2) - MUS MUSCULUS (
   HXC5_HUMAN       HOMEOBOX PROTEIN HOX-C5 (HOX-3D) (CP11) - HOMO SAPIENS (HUMA
   HXC5_BRARE       HOMEOBOX PROTEIN HOX-C5 (HOX-3.4) (ZF-25) - BRACHYDANIO RERI
   HXB4_CHICK       HOMEOBOX PROTEIN HOX-B4 (CHOX-Z) - GALLUS GALLUS (CHICKEN).
   O13074           HOMEOBOX PROTEIN HOX-B4 (HOXB-4) - FUGU RUBRIPES (JAPANESE P
   HXB4_MOUSE       HOMEOBOX PROTEIN HOX-B4 (HOX-2.6) - MUS MUSCULUS (MOUSE).
   HXB4_HUMAN       HOMEOBOX PROTEIN HOX-B4 (HOX-2F) (HOX-2.6) - HOMO SAPIENS (H
   Q26868           FUSHI-TARAZU - TRIBOLIUM CASTANEUM (RED FLOUR BEETLE).
   HXB4_XENLA       HOMEOBOX PROTEIN HOX-B4 (XHOX-1A) - XENOPUS LAEVIS (AFRICAN 
   O42503           HOMEOBOX PROTEIN HOXC-8 - FUGU RUBRIPES (JAPANESE PUFFERFISH
   O76762           ABDOMINAL-A HOMEOTIC PROTEIN - ANOPHELES GAMBIAE (AFRICAN MA
   HMAA_DROME       HOMEOBOX PROTEIN ABDOMINAL-A - DROSOPHILA MELANOGASTER (FRUI
   HMLA_DROME       HOMEOTIC LABIAL PROTEIN (F24) (F90-2) - DROSOPHILA MELANOGAS
   HXD8_MOUSE       HOMEOBOX PROTEIN HOX-D8 (HOX-4.3) (HOX-5.4) - MUS MUSCULUS (
   O46127           LOX7-HTR GENE - HELOBDELLA TRISERIALIS (LEECH).
   Q24782           CNOX5 HOMEODOMAIN PROTEIN - ELEUTHERIA DICHOTOMA.
   HMZ2_DROME       ZERKNUELLT PROTEIN 2 (ZEN-2) - DROSOPHILA MELANOGASTER (FRUI
   HXC6_NOTVI       HOMEOBOX PROTEIN HOX-C6 (NVHOX-1) (FH-2) - NOTOPHTHALMUS VIR
   O57374           HOMEOBOX PROTEIN HOX-D4 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEB
   O61575           HOMEOTIC PROTEIN - PRISTIONCHUS PACIFICUS.
   HXA9_HUMAN       HOMEOBOX PROTEIN HOX-A9 (HOX-1G) - HOMO SAPIENS (HUMAN).
   HXC9_MOUSE       HOMEOBOX PROTEIN HOX-C9 (HOX-3.2) - MUS MUSCULUS (MOUSE).
   HXD9_HUMAN       HOMEOBOX PROTEIN HOX-D9 (HOX-4C) (HOX-5.2) - HOMO SAPIENS (H
   HXD9_MOUSE       HOMEOBOX PROTEIN HOX-D9 (HOX-4.4) (HOX-5.2) - MUS MUSCULUS (
   O43369           HOMEOBOX PROTEIN HOX-A9 (HOX-1G) - HOMO SAPIENS (HUMAN).
   O43429           HOMEOBOX PROTEIN HOX-A9 (HOX-1G) - HOMO SAPIENS (HUMAN).
   O70154           HOMEOBOX PROTEIN HOX-A9 (HOX-1.7) - MUS MUSCULUS (MOUSE).
   O75805           HOXA-9A - HOMO SAPIENS (HUMAN).
   O75806           HOXA-9B - HOMO SAPIENS (HUMAN).
   Q60499           HOX-1.7 PROTEIN (GPK/5) - CAVIA PORCELLUS (GUINEA PIG).
   Q64083           HOX-C|HOX-3 {CLONE 27B} - RATTUS NORVEGICUS (RAT).
   O76842           HOMEOBOX PROTEIN - CUPIENNIUS SALEI.
   O42502           HOMEOBOX PROTEIN HOX-C9 (HOXC-9) - FUGU RUBRIPES (JAPANESE P
   Q23990           SEX COMBS REDUCED HOMEODOMAIN PROTEIN - DROSOPHILA MELANOGAS
   HOX3_BRAFL       HOMEOBOX PROTEIN HOX3 - BRANCHIOSTOMA FLORIDAE (FLORIDA LANC
   Q99955           HOMEOBOX PROTEIN HOX-D3 (HOX-4A) - HOMO SAPIENS (HUMAN).
   Q64084           HOX-D|HOX-4 - RATTUS NORVEGICUS (RAT).
   O93353           HOMEOBOX PROTEIN HOX-D3 - GALLUS GALLUS (CHICKEN).
   O43365           HOMEOBOX PROTEIN HOX-A3 (HOX-1E) - HOMO SAPIENS (HUMAN).
   O42506           HOMEOBOX PROTEIN HOX-A9 (HOXA-9) - FUGU RUBRIPES (JAPANESE P
   HXD3_MOUSE       HOMEOBOX PROTEIN HOX-D3 (HOX-4.1) (MH-19) - MUS MUSCULUS (MO
   HXD3_HUMAN       HOMEOBOX PROTEIN HOX-D3 (HOX-4A) - HOMO SAPIENS (HUMAN).
   HXA3_MOUSE       HOMEOBOX PROTEIN HOX-A3 (HOX-1.5) (MO-10) - MUS MUSCULUS (MO
   HMUX_DROME       HOMEOTIC ULTRABITHORAX PROTEIN - DROSOPHILA MELANOGASTER (FR
   O76759           ULTRABITHORAX HOMEOTIC PROTEIN IVA - ANOPHELES GAMBIAE (AFRI
   O76758           ULTRABITHORAX HOMEOTIC PROTEIN IIA - ANOPHELES GAMBIAE (AFRI
   O44269           ULTRABITHORAX - ACANTHOKARA KAPUTENSIS.
   HXA1_HUMAN       HOMEOBOX PROTEIN HOX-A1 (HOX-1F) - HOMO SAPIENS (HUMAN).
   HXA1_MOUSE       HOMEOBOX PROTEIN HOX-A1 (HOX-1.6) (HOMEOTIC PROTEIN ERA-1-99
   O43363           HOMEOBOX PROTEIN HOX-A1 (HOX-1F) - HOMO SAPIENS (HUMAN).
   HMPB_DROME       HOMEOTIC PROBOSCIPEDIA PROTEIN - DROSOPHILA MELANOGASTER (FR
   Q25679           HOX1 GENE - PODOCORYNE CARNEA.
   P91714           HOMEODOMAIN PROTEIN - DUGESIA TIGRINA (PLANARIAN).
   HXB1_CHICK       HOMEOBOX PROTEIN HOX-B1 (GHOX-LAB) - GALLUS GALLUS (CHICKEN)
   Q25131           HRHOX-1 - HALOCYNTHIA RORETZI (SEA SQUIRT).
   MAB5_CAEEL       HOMEOBOX PROTEIN MAB-5 - CAENORHABDITIS ELEGANS.
   HB9_HUMAN        HOMEOBOX PROTEIN HB9 - HOMO SAPIENS (HUMAN).
   HXA2_CHICK       HOMEOBOX PROTEIN HOX-A2 - GALLUS GALLUS (CHICKEN).
   HXA2_MOUSE       HOMEOBOX PROTEIN HOX-A2 (HOX-1.11) - MUS MUSCULUS (MOUSE).
   HXA2_RAT         HOMEOBOX PROTEIN HOX-A2 (HOX-1.11) - RATTUS NORVEGICUS (RAT)
   HXB2_HUMAN       HOMEOBOX PROTEIN HOX-B2 (HOX-2H) (HOX-2.8) (K8) - HOMO SAPIE
   O43364           HOMEOBOX PROTEIN HOX-A2 - HOMO SAPIENS (HUMAN).
   O93365           HOMEOBOX TRANSCRIPTION FACTOR - BRACHYDANIO RERIO (ZEBRAFISH
   HXB1_HUMAN       HOMEOBOX PROTEIN HOX-B1 (HOX-2I) - HOMO SAPIENS (HUMAN).
   HXB1_MOUSE       HOMEOBOX PROTEIN HOX-B1 (HOX-2.9) - MUS MUSCULUS (MOUSE).
   O42139           HOMEOBOX PROTEIN PXHOXC8 - XENOPUS LAEVIS (AFRICAN CLAWED FR
   O62523           MRNA ENCODING HOX3 GENE - CUPIENNIUS SALEI.
   LI39_CAEEL       HOMEOBOX PROTEIN LIN-39 - CAENORHABDITIS ELEGANS.
   HXB9_MOUSE       HOMEOBOX PROTEIN HOX-B9 (HOX-2.5) - MUS MUSCULUS (MOUSE).
   HXB9_XENLA       HOMEOBOX PROTEIN HOX-B9 (XLHBOX-6) - XENOPUS LAEVIS (AFRICAN
   HXA1_BRARE       HOMEOBOX PROTEIN HOX-A1 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEB
   HXB3_MOUSE       HOMEOBOX PROTEIN HOX-B3 (HOX-2.7) (MH-23) - MUS MUSCULUS (MO
   HXB3_HUMAN       HOMEOBOX PROTEIN HOX-B3 (HOX-2G) (HOX-2.7) - HOMO SAPIENS (H
   HXB3_CHICK       HOMEOBOX PROTEIN HOX-B3 (CHOX-2.7) - GALLUS GALLUS (CHICKEN)
   O44936           SPHBOX7 - STRONGYLOCENTROTUS PURPURATUS (PURPLE SEA URCHIN).
   Q25182           ANTENNAPEDIA CLASS HOMEOBOX-RELATED PROTEIN MRNA - HYDRA ATT
   O17476           HOX HOMEOBOX PROTEIN - HYDRACTINIA SYMBIOLONGICARPUS.
   HXB1_CYPCA       HOMEOBOX PROTEIN HOX-B1 - CYPRINUS CARPIO (COMMON CARP).
   O13073           HOMEOBOX PROTEIN HOXB-1 - FUGU RUBRIPES (JAPANESE PUFFERFISH
   HXD1_MOUSE       HOMEOBOX PROTEIN HOX-D1 (HOX-4.9) - MUS MUSCULUS (MOUSE).
   HXD1_XENLA       HOMEOBOX PROTEIN HOX-D1 (HOX.LAB1) - XENOPUS LAEVIS (AFRICAN
   Q91767           ORGANIZER SPECIFIC HOMEOBOX XLAB - XENOPUS LAEVIS (AFRICAN C
   MOX2_HUMAN       HOMEOBOX PROTEIN MOX-2 (GROWTH ARREST-SPECIFIC HOMEOBOX) - H
   MOX2_MOUSE       HOMEOBOX PROTEIN MOX-2 - MUS MUSCULUS (MOUSE).
   MOX2_RAT         HOMEOBOX PROTEIN MOX-2 (GROWTH ARREST-SPECIFIC HOMEOBOX) - R
   MOX2_XENLA       HOMEOBOX PROTEIN MOX-2 - XENOPUS LAEVIS (AFRICAN CLAWED FROG
   HM8_XENLA        HOMEOBOX PROTEIN 8 (XLHBOX-8) - XENOPUS LAEVIS (AFRICAN CLAW
   IPF1_HUMAN       INSULIN PROMOTER FACTOR 1 (IPF-1) (ISLET/DUODENUM HOMEOBOX-1
   IPF1_MESAU       INSULIN PROMOTER FACTOR 1 (IPF-1) (HOMEODOMAIN PROTEIN PDX1)
   IPF1_MOUSE       INSULIN PROMOTER FACTOR 1 (IPF-1) (ISLET/DUODENUM HOMEOBOX-1
   IPF1_RAT         INSULIN PROMOTER FACTOR 1 (IPF-1) (ISLET/DUODENUM HOMEOBOX-1
   O60594           INSULIN UPSTREAM FACTOR 1 - HOMO SAPIENS (HUMAN).
   HMZ1_DROSU       ZERKNUELLT PROTEIN - DROSOPHILA SUBOBSCURA (FRUIT FLY).
   HMZ1_DROME       ZERKNUELLT PROTEIN 1 (ZEN-1) - DROSOPHILA MELANOGASTER (FRUI
   Q19937           SIMILAR TO HOMEOBOX PROTEINS - CAENORHABDITIS ELEGANS.
   O93290           DEVELOPMENTAL TRANSCRIPTION FACTOR - ORYZIAS LATIPES (MEDAKA
   GSHI_MOUSE       HOMEOBOX PROTEIN GSH-1 - MUS MUSCULUS (MOUSE).
   GSH2_MOUSE       HOMEOBOX PROTEIN GSH-2 - MUS MUSCULUS (MOUSE).
   Q25144           HROX1 - HALIOTIS RUFESCENS (CALIFORNIA RED ABALONE).
   Q26381           BTN=HOMEODOMAIN GENE BUTTONLESS - DROSOPHILA MELANOGASTER (F
   O73726           HOMEOBOX PROTEIN PDX-1 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBR
   O76938           HOMEODOMAIN PROTEIN - DUGESIA TIGRINA (PLANARIAN).
   Q04787           BRAIN-SPECIFIC HOMEOBOX PROTEIN - DROSOPHILA MELANOGASTER (F
   HMBP_DROME       HOMEOBOX PROTEIN BAGPIPE (NK-3) - DROSOPHILA MELANOGASTER (F
   HMMC_BRARE       HOMEOBOX PROTEIN MSH-C - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBR
   HMX2_CHICK       HOMEOBOX PROTEIN MSX-2 (CHOX-8) (GHOX-8) - GALLUS GALLUS (CH
   HMX2_COTJA       HOMEOBOX PROTEIN MSX-2 (MSX-1) (QUOX-7) - COTURNIX COTURNIX 
   HMX2_MOUSE       HOMEOBOX PROTEIN MSX-2 (HOX-8.1) - MUS MUSCULUS (MOUSE).
   O44937           SPMSX - STRONGYLOCENTROTUS PURPURATUS (PURPLE SEA URCHIN).
   P70061           BAGPIPE-RELATED PROTEIN XBAP - XENOPUS LAEVIS (AFRICAN CLAWE
   O93590           HOMEODOMAIN PROTEIN ZAMPOGNA - XENOPUS LAEVIS (AFRICAN CLAWE
   O13090           NKX-3.2 - PLEURODELES WALTLII (IBERIAN RIBBED NEWT).
   HK32_MOUSE       HOMEOBOX PROTEIN NKX-3.2 (BAGPIPE HOMEOBOX PROTEIN HOMOLOG 1
   MOX1_HUMAN       HOMEOBOX PROTEIN MOX-1 - HOMO SAPIENS (HUMAN).
   MOX1_MOUSE       HOMEOBOX PROTEIN MOX-1 - MUS MUSCULUS (MOUSE).
   O13091           NKX-3.3 - PLEURODELES WALTLII (IBERIAN RIBBED NEWT).
   HK31_MOUSE       HOMEOBOX PROTEIN NKX-3.1 - MUS MUSCULUS (MOUSE).
   HK31_HUMAN       HOMEOBOX PROTEIN NKX-3.1 - HOMO SAPIENS (HUMAN).
   Q25186           HOM/HOX HOMEODOMAIN TRANSCRIPTION FACTOR - HYDRA ATTENUATA (
   HXCA_MOUSE       HOMEOBOX PROTEIN HOX-C10 (HOX-3.6) - MUS MUSCULUS (MOUSE).
   HMMA_BRARE       HOMEOBOX PROTEIN MSH-A - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBR
   HMX1_BOVIN       HOMEOBOX PROTEIN MSX-1 - BOS TAURUS (BOVINE).
   HMX1_CHICK       HOMEOBOX PROTEIN MSX-1 (CHOX-7) - GALLUS GALLUS (CHICKEN).
   HMX1_HUMAN       HOMEOBOX PROTEIN MSX-1 (HOX-7) - HOMO SAPIENS (HUMAN).
   HMX1_MOUSE       HOMEOBOX PROTEIN MSX-1 (HOX-7) (HOX-7.1) - MUS MUSCULUS (MOU
   HMXX_CHICK       HOMEOBOX PROTEIN GHOX-7 (CHOX-7) (HOX-7) - GALLUS GALLUS (CH
   MSX3_MOUSE       HOMEOBOX PROTEIN MSX-3 - MUS MUSCULUS (MOUSE).
   Q90235           MSX1 PROTEIN - AMBYSTOMA MEXICANUM (AXOLOTL).
   Q90455           HOMEODOMAIN PROTEIN MSXE - BRACHYDANIO RERIO (ZEBRAFISH) (ZE
   HMSH_DROME       MUSCLE SEGMENTATION HOMEOBOX - DROSOPHILA MELANOGASTER (FRUI
   Q24481           MSH PROTEIN - DROSOPHILA MELANOGASTER (FRUIT FLY).
   YRN1_CAEEL       HYPOTHETICAL 25.2 KD HOMEOBOX PROTEIN R07B1.1 IN CHROMOSOME 
   O70218           H6 HOMEO BOX 1 (HOMEOBOX CONTAINING NUCLEAR TRANSCRIPTIONAL 
   HXDA_HUMAN       HOMEOBOX PROTEIN HOX-D10 (HOX-4D) (HOX-4E) - HOMO SAPIENS (H
   HXDA_MOUSE       HOMEOBOX PROTEIN HOX-D10 (HOX-4.5) (HOX-5.3) - MUS MUSCULUS 
   HMRO_DROME       HOMEOBOX PROTEIN ROUGH - DROSOPHILA MELANOGASTER (FRUIT FLY)
   Q24487           ROUGH GENE HOMEO-BOX DNA - DROSOPHILA MELANOGASTER (FRUIT FL
   HMMD_BRARE       HOMEOBOX PROTEIN MSH-D - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBR
   Q90853           HOMEOBOX PROTEIN - GALLUS GALLUS (CHICKEN).
   O88699           HOMEODOMAIN PROTEIN - MUS MUSCULUS (MOUSE).
   O57601           NKX5-1 PROTEIN - GALLUS GALLUS (CHICKEN).
   HK51_MOUSE       HOMEOBOX PROTEIN NKX-5.1 - MUS MUSCULUS (MOUSE).
   Q90469           HOMEOBOX PROTEIN HOX-D10 - BRACHYDANIO RERIO (ZEBRAFISH) (ZE
   Q24780           CNOX3 HOMEODOMAIN PROTEIN - ELEUTHERIA DICHOTOMA.
   O43605           HOMEOBOX PROTEIN A10 - HOMO SAPIENS (HUMAN).
   O43370           HOMEOBOX PROTEIN HOX-A10 - HOMO SAPIENS (HUMAN).
   HXAA_MOUSE       HOMEOBOX PROTEIN HOX-A10 (HOX-1.8) - MUS MUSCULUS (MOUSE).
   HXAA_HUMAN       HOMEOBOX PROTEIN HOX-A10 (HOX-1H) (HOX-1.8) (PL) - HOMO SAPI
   HMN1_DROME       HOMEOBOX PROTEIN NK-1 (S59/2) - DROSOPHILA MELANOGASTER (FRU
   SAX1_MOUSE       HOMEOBOX PROTEIN SAX-1 (NKX-1.1) - MUS MUSCULUS (MOUSE).
   HK23_MOUSE       HOMEOBOX PROTEIN NKX-2.3 - MUS MUSCULUS (MOUSE).
   Q98871           HOMEODOMAIN PROTEIN NKX2.3 - BRACHYDANIO RERIO (ZEBRAFISH) (
   Q91863           XNKX-2.3 (ALLELE XNKX-2.3B2) - XENOPUS LAEVIS (AFRICAN CLAWE
   Q91862           XNKX-2.3 (ALLELE XNKX-2.3B1) - XENOPUS LAEVIS (AFRICAN CLAWE
   Q91861           XNKX-2.3 (ALLELE XNKX-2.3A) - XENOPUS LAEVIS (AFRICAN CLAWED
   Q91623           NKX-RELATED PROTEIN - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
   O73907           CNKX-2.3 PROTEIN - GALLUS GALLUS (CHICKEN).
   O61286           CSNKX - CIONA SAVIGNYI.
   HMFT_DROME       SEGMENTATION PROTEIN FUSHI TARAZU - DROSOPHILA MELANOGASTER 
   HK26_MOUSE       HOMEOBOX PROTEIN NKX-2.6 - MUS MUSCULUS (MOUSE).
   O42505           HOMEOBOX PROTEIN HOXA-9 - FUGU RUBRIPES (JAPANESE PUFFERFISH
   HMDL_BRAFL       HOMEOBOX PROTEIN DLL HOMOLOG - BRANCHIOSTOMA FLORIDAE (FLORI
   HMDL_DROME       HOMEOTIC DISTAL-LESS PROTEIN (PROTEIN BRISTA) - DROSOPHILA M
   Q91964           SENSORY ORGAN HOMEOBOX PROTEIN SOHO - GALLUS GALLUS (CHICKEN
   DLX2_BRARE       HOMEOBOX PROTEIN DLX-2 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBR
   DLX5_BRARE       HOMEOBOX PROTEIN DLX-5 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBR
   DLX2_MOUSE       HOMEOBOX PROTEIN DLX-2 (HOMEOBOX PROTEIN TES-1) - MUS MUSCUL
   DLX2_HUMAN       HOMEOBOX PROTEIN DLX-2 - HOMO SAPIENS (HUMAN).
   O76848           HOMEOBOX PROTEIN - CUPIENNIUS SALEI.
   HMFT_DROHY       SEGMENTATION PROTEIN FUSHI TARAZU - DROSOPHILA HYDEI (FRUIT 
   HMRO_DROVI       HOMEOBOX PROTEIN ROUGH - DROSOPHILA VIRILIS (FRUIT FLY).
   Q21169           K03A11.3 PROTEIN - CAENORHABDITIS ELEGANS.
   DLX3_AMBME       HOMEOBOX PROTEIN DLX-3 - AMBYSTOMA MEXICANUM (AXOLOTL).
   DLX3_BRARE       HOMEOBOX PROTEIN DLX-3 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBR
   DLX3_HUMAN       HOMEOBOX PROTEIN DLX-3 - HOMO SAPIENS (HUMAN).
   DLX3_MOUSE       HOMEOBOX PROTEIN DLX-3 - MUS MUSCULUS (MOUSE).
   DLX3_NOTVI       HOMEOBOX PROTEIN DLX-3 (BOX-4) (NVHBOX-4) - NOTOPHTHALMUS VI
   DLX3_PLEWA       DISTAL-LESS LIKE PROTEIN DLX-3 - PLEURODELES WALTLII (IBERIA
   HMD2_XENLA       HOMEOBOX PROTEIN DLL-2 (XDLL-2) - XENOPUS LAEVIS (AFRICAN CL
   Q98873           HOMEODOMAIN PROTEIN NKX2.7 - BRACHYDANIO RERIO (ZEBRAFISH) (
   HK25_MOUSE       HOMEOBOX PROTEIN NKX-2.5 (CARDIAC-SPECIFIC HOMEOBOX) (HOMEOB
   HK25_HUMAN       HOMEOBOX PROTEIN NKX-2.5 (CARDIAC-SPECIFIC HOMEOBOX) (HOMEOB
   Q18532           SIMILARITY TO NK-2 HOMEOBOX DOMAIN - CAENORHABDITIS ELEGANS.
   HMAB_DROME       HOMEOBOX PROTEIN ABDOMINAL-B (P3) (INFRAABDOMINAL 7) (IAB-7)
   HK25_CHICK       HOMEOBOX PROTEIN NKX-2.5 (CNKX-2.5) - GALLUS GALLUS (CHICKEN
   Q98872           HOMEODOMAIN PROTEIN NKX2.5 - BRACHYDANIO RERIO (ZEBRAFISH) (
   O13160           NKX2.5=TINMAN HOMEODOMAIN HOMOLOG - BRACHYDANIO RERIO (ZEBRA
   HK25_XENLA       HOMEOBOX PROTEIN NKX-2.5 - XENOPUS LAEVIS (AFRICAN CLAWED FR
   HMX2_HUMAN       HOMEOBOX PROTEIN MSX-2 (HOX-8) - HOMO SAPIENS (HUMAN).
   O13005           NKX2-8 GENE - GALLUS GALLUS (CHICKEN).
   O13053           NKX2.8 MRNA - GALLUS GALLUS (CHICKEN).
   HM16_CAEEL       HOMEOBOX PROTEIN ENGRAILED-LIKE CEH-16 - CAENORHABDITIS ELEG
   O35767           HOMEOBOX PROTEIN NKX-2.5 (CARDIAC-SPECIFIC HOMEOBOX) (HOMEOB
   Q26371           ENGRAILED HOMOLOG - TRIBOLIUM CASTANEUM (RED FLOUR BEETLE).
   HMEN_DROVI       SEGMENTATION POLARITY HOMEOBOX PROTEIN ENGRAILED - DROSOPHIL
   HMEN_DROME       SEGMENTATION POLARITY HOMEOBOX PROTEIN ENGRAILED - DROSOPHIL
   HMD1_CHICK       HOMEOBOX PROTEIN CHOX-CAD - GALLUS GALLUS (CHICKEN).
   Q91622           XCAD2 PROTEIN - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
   Q91152           MSX-1 PROTEIN - NOTOPHTHALMUS VIRIDESCENS (EASTERN NEWT) (TR
   CDX4_MOUSE       HOMEOBOX PROTEIN CDX-4 (CAUDAL-TYPE HOMEOBOX PROTEIN 4) - MU
   Q90262           ZF-CAD1 PROTEIN - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANIO
   Q90320           CAUDAL HOMOLOG CDX1 - CYPRINUS CARPIO (COMMON CARP).
   HMEN_BOMMO       SEGMENTATION POLARITY HOMEOBOX PROTEIN ENGRAILED - BOMBYX MO
   HMIN_BOMMO       HOMEOBOX PROTEIN INVECTED - BOMBYX MORI (SILK MOTH).
   DLX4_BRARE       HOMEOBOX PROTEIN DLX-4 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBR
   DLX1_BRARE       HOMEOBOX PROTEIN DLX-1 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBR
   DLX6_BRARE       HOMEOBOX PROTEIN DLX-6 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBR
   DLX1_MOUSE       HOMEOBOX PROTEIN DLX-1 - MUS MUSCULUS (MOUSE).
   DLX5_CHICK       HOMEOBOX PROTEIN DLX-5 - GALLUS GALLUS (CHICKEN).
   HMD3_XENLA       HOMEOBOX PROTEIN DLL-3 (XDLL-3) - XENOPUS LAEVIS (AFRICAN CL
   DLX5_RAT         HOMEOBOX PROTEIN DLX-5 (DLX-3) (RDLX) - RATTUS NORVEGICUS (R
   DLX5_MOUSE       HOMEOBOX PROTEIN DLX-5 - MUS MUSCULUS (MOUSE).
   GBX2_CHICK       HOMEOBOX PROTEIN GBX-2 (GASTRULATION AND BRAIN-SPECIFIC HOME
   GBX2_HUMAN       HOMEOBOX PROTEIN GBX-2 (GASTRULATION AND BRAIN-SPECIFIC HOME
   GBX2_MOUSE       HOMEOBOX PROTEIN GBX-2 (GASTRULATION AND BRAIN-SPECIFIC HOME
   GBX2_XENLA       HOMEOBOX PROTEIN GBX-2 (GASTRULATION AND BRAIN-SPECIFIC HOME
   Q24136           UNPLUGGED - DROSOPHILA MELANOGASTER (FRUIT FLY).
   H114_BRARE       HOMEOBOX PROTEIN HOX-114 - BRACHYDANIO RERIO (ZEBRAFISH) (ZE
   HMIN_DROME       HOMEOBOX PROTEIN INVECTED - DROSOPHILA MELANOGASTER (FRUIT F
   CDX1_HUMAN       HOMEOBOX PROTEIN CDX-1 (CAUDAL-TYPE HOMEOBOX PROTEIN 1) - HO
   CDX1_MOUSE       HOMEOBOX PROTEIN CDX-1 (CAUDAL-TYPE HOMEOBOX PROTEIN 1) - MU
   Q25212           INVECTED HOMEODOMAIN PROTEIN - JUNONIA COENIA (PEACOCK BUTTE
   O61640           HOMEOBOX PROTEIN NK7.1 - DROSOPHILA MELANOGASTER (FRUIT FLY)
   O15522           HOMEOBOX PROTEIN NKX-2.8 - HOMO SAPIENS (HUMAN).
   O70584           HOMEOBOX PROTEIN NKX-2.9 - MUS MUSCULUS (MOUSE).
   HME3_BRARE       HOMEOBOX PROTEIN ENGRAILED-3 (ZF-EN-1) - BRACHYDANIO RERIO (
   HMEN_ANOGA       SEGMENTATION POLARITY HOMEOBOX PROTEIN ENGRAILED - ANOPHELES
   HME2_BRARE       HOMEOBOX PROTEIN ENGRAILED-2 (ZF-EN-2) - BRACHYDANIO RERIO (
   HMED_XENLA       HOMEOBOX PROTEIN ENGRAILED-2B (EN-2B) (EN2 MABEN) - XENOPUS 
   HME2_CHICK       HOMEOBOX PROTEIN ENGRAILED-2 (GG-EN-2) - GALLUS GALLUS (CHIC
   Q26449           LOX3A=HOMEOBOX PROTEIN...LOX3C=HOMEOBOX PROTEIN - HIRUDO MED
   HMEN_ARTSF       HOMEOBOX PROTEIN ENGRAILED - ARTEMIA SANFRANCISCANA (BRINE S
   CDX4_HUMAN       HOMEOBOX PROTEIN CDX-4 (CAUDAL-TYPE HOMEOBOX PROTEIN 4) - HO
   Q91926           XVENT-1 PROTEIN - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
   Q26451           LOX3=HOMEOBOX - HIRUDO MEDICINALIS (MEDICINAL LEECH).
   HMD4_XENLA       HOMEOBOX PROTEIN DLL-4 (XDLL-4) - XENOPUS LAEVIS (AFRICAN CL
   P90688           ENGRAILED PROTEIN - BRANCHIOSTOMA FLORIDAE (FLORIDA LANCELET
   HME2_HUMAN       HOMEOBOX PROTEIN ENGRAILED-2 (HU-EN-2) - HOMO SAPIENS (HUMAN
   HMEC_XENLA       HOMEOBOX PROTEIN ENGRAILED-2A (EN-2A) (EN2 1.4) - XENOPUS LA
   HME2_MOUSE       HOMEOBOX PROTEIN ENGRAILED-2 (MO-EN-2) - MUS MUSCULUS (MOUSE
   CDX2_HUMAN       HOMEOBOX PROTEIN CDX-2 (CAUDAL-TYPE HOMEOBOX PROTEIN 2) (CDX
   Q17243           CAD PROTEIN - BOMBYX MORI (SILK MOTH).
   P79788           HOMEOBOX PROTEIN - GALLUS GALLUS (CHICKEN).
   CDX2_MESAU       HOMEOBOX PROTEIN CDX-2 (CAUDAL-TYPE HOMEOBOX PROTEIN 2) - ME
   O13023           HOMEODOMAIN PROTEIN XHEX - XENOPUS LAEVIS (AFRICAN CLAWED FR
   HMPH_MOUSE       HOMEOBOX PROTEIN PRH (HOMEOBOX PROTEIN HEX) - MUS MUSCULUS (
   HMPH_HUMAN       HOMEOBOX PROTEIN PRH (HOMEOBOX PROTEIN HEX) - HOMO SAPIENS (
   HMPH_CHICK       HOMEOBOX PROTEIN PRH - GALLUS GALLUS (CHICKEN).
   Q26601           HOMEOBOX PROTEIN ENGRAILED-LIKE SMOX-2 - SCHISTOSOMA MANSONI
   CDX2_MOUSE       HOMEOBOX PROTEIN CDX-2 (CAUDAL-TYPE HOMEOBOX PROTEIN 2) - MU
   O42173           POSTERIOR-VENTRAL 1 TRANSCRIPTION FACTOR - XENOPUS LAEVIS (A
   YZQ6_CAEEL       HYPOTHETICAL 22.9 KD HOMEOBOX PROTEIN F20D12.6 IN CHROMOSOME
   HMTI_DROME       MUSCLE-SPECIFIC HOMEOBOX PROTEIN TINMAN (MSH-2) (NK-4) - DRO
   Q24787           HOMEOBOX-CONTAINING PROTEIN - EPHYDATIA FLUVIATILIS.
   HMCA_DROME       HOMEOTIC CAUDAL PROTEIN - DROSOPHILA MELANOGASTER (FRUIT FLY
   Q21578           SIMILAR TO HOMEOBOX PROTEIN. NCBI GI: 1293798 - CAENORHABDIT
   DLX7_MOUSE       HOMEOBOX PROTEIN DLX-7 - MUS MUSCULUS (MOUSE).
   O16132           NK-2 CLASS HOMEOBOX TRANSCRIPTION FACTOR - HYDRA ATTENUATA (
   HMH2_DUGTI       HOMEOBOX PROTEIN DTH-2 - DUGESIA TIGRINA (PLANARIAN).
   Q90481           HOMEOBOX PROTEIN NKX-2.2 - BRACHYDANIO RERIO (ZEBRAFISH) (ZE
   O77158           HOMEOBOX PROTEIN NKX2-1 - BRANCHIOSTOMA FLORIDAE (FLORIDA LA
   HNK2_XENLA       HOMEOBOX PROTEIN XENK-2 - XENOPUS LAEVIS (AFRICAN CLAWED FRO
   HK22_MOUSE       HOMEOBOX PROTEIN NKX-2.2 - MUS MUSCULUS (MOUSE).
   HK22_MESAU       HOMEOBOX PROTEIN NKX-2.2 - MESOCRICETUS AURATUS (GOLDEN HAMS
   DLX7_BRARE       HOMEOBOX PROTEIN DLX-7 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBR
   DLX8_BRARE       HOMEOBOX PROTEIN DLX-8 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBR
   Q98863           EVX-2 GENE - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANIO).
   HX3_XENLA        HOMEOBOX PROTEIN XHOX-3 - XENOPUS LAEVIS (AFRICAN CLAWED FRO
   EVX2_MOUSE       HOMEOBOX EVEN-SKIPPED HOMOLOG PROTEIN 2 (EVX-2) - MUS MUSCUL
   EVX1_MOUSE       HOMEOBOX EVEN-SKIPPED HOMOLOG PROTEIN 1 (EVX-1) - MUS MUSCUL
   EVX1_HUMAN       HOMEOBOX EVEN-SKIPPED HOMOLOG PROTEIN 1 (EVX-1) - HOMO SAPIE
   HMD1_CAEEL       PUTATIVE HOMEOBOX PROTEIN C28A5.4 - CAENORHABDITIS ELEGANS.
   Q26436           NK-2=HOMEOBOX GENE - DROSOPHILA MELANOGASTER (FRUIT FLY).
   HMN2_DROME       HOMEOBOX PROTEIN VND (VENTRAL NERVOUS SYSTEM DEFECTIVE PROTE
   Q90265           EVE1 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANIO).
   Q91542           (XCAD-3) - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
   Q24781           CNOX4 HOMEODOMAIN PROTEIN - ELEUTHERIA DICHOTOMA.
   HMD1_XENLA       HOMEOBOX PROTEIN DLL-1 (DLL) (XDLL) - XENOPUS LAEVIS (AFRICA
   Q91914           HOMEOBOX PROTEIN - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
   HMEV_DROME       SEGMENTATION PROTEIN EVEN-SKIPPED - DROSOPHILA MELANOGASTER 
   P92067           TRANSCRIPTION FACTOR HOMOLOG - TRIBOLIUM CASTANEUM (RED FLOU
   O01353           PAIR-RULE TRANSCRIPTION FACTOR EVEN-SKIPPED - DROSOPHILA PIC
   Q91669           XBR-1B - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
   Q91893           VENT-2 TRANSCRIPTION FACTOR - XENOPUS LAEVIS (AFRICAN CLAWED
   Q91878           VOX-15 - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
   Q91877           VOX-1 - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
   O14954           THYROID TRANSCRIPTION FACTOR 1 (THYROID NUCLEAR FACTOR 1) (T
   TTF1_RAT         THYROID TRANSCRIPTION FACTOR 1 (THYROID NUCLEAR FACTOR 1) (T
   TTF1_MOUSE       THYROID TRANSCRIPTION FACTOR 1 (THYROID NUCLEAR FACTOR 1) (T
   TTF1_HUMAN       THYROID TRANSCRIPTION FACTOR 1 (THYROID NUCLEAR FACTOR 1) (T
   TTF1_CANFA       THYROID TRANSCRIPTION FACTOR 1 (THYROID NUCLEAR FACTOR 1) (T
   O14955           THYROID TRANSCRIPTION FACTOR 1 (THYROID NUCLEAR FACTOR 1) (T
   HME1_HUMAN       HOMEOBOX PROTEIN ENGRAILED-1 (HU-EN-1) - HOMO SAPIENS (HUMAN
   HME1_MOUSE       HOMEOBOX PROTEIN ENGRAILED-1 (MO-EN-1) - MUS MUSCULUS (MOUSE
   Q93793           F55B12.1 PROTEIN - CAENORHABDITIS ELEGANS.
   O17319           NK-2 CLASS HOMEODOMAIN PROTEIN - CAENORHABDITIS BRIGGSAE.
   O17318           NK-2 CLASS HOMEODOMAIN PROTEIN - CAENORHABDITIS ELEGANS.
   O77058           THYROID TRANSCRIPTION FACTOR-1 - HALOCYNTHIA RORETZI (SEA SQ
   HM22_CAEEL       HOMEOBOX PROTEIN CEH-22 - CAENORHABDITIS ELEGANS.
   HOX1_HALRO       HOMEOBOX PROTEIN AHOX1 - HALOCYNTHIA RORETZI (SEA SQUIRT).
   O18325           EVEN-SKIPPED PAIR-RULE - BOMBYX MORI (SILK MOTH).
   O35762           HOMEOBOX PROTEIN NKX-6.1 - RATTUS NORVEGICUS (RAT).
   Q60554           HOMEOBOX PROTEIN NKX-6.1 - MESOCRICETUS AURATUS (GOLDEN HAMS
   P78426           HOMEOBOX PROTEIN NKX-6.1 - HOMO SAPIENS (HUMAN).
   Q24255           HOMEOBOX PROTEIN B-H1 (HOMEOBOX PROTEIN BARH1) - DROSOPHILA 
   Q23838           BARH1 PROTEIN - DROSOPHILA ANANASSAE (FRUIT FLY).
   HME1_CHICK       HOMEOBOX PROTEIN ENGRAILED-1 (GG-EN-1) - GALLUS GALLUS (CHIC
   O08686           BARX2 - MUS MUSCULUS (MOUSE).
   O43518           BARX2 - HOMO SAPIENS (HUMAN).
   HME1_BRARE       HOMEOBOX PROTEIN ENGRAILED-1 - BRACHYDANIO RERIO (ZEBRAFISH)
   HMH1_DUGTI       HOMEOBOX PROTEIN DTH-1 - DUGESIA TIGRINA (PLANARIAN).
   HMH2_DROME       HOMEOBOX PROTEIN H2.0 - DROSOPHILA MELANOGASTER (FRUIT FLY).
   HLX1_HUMAN       HOMEOBOX PROTEIN HLX1 (HOMEOBOX PROTEIN HB24) - HOMO SAPIENS
   HLX1_MOUSE       HOMEOBOX PROTEIN HLX1 - MUS MUSCULUS (MOUSE).
   P70159           BARH-LIKE HOMEOBOX 1 (TRANSCRIPTION FACTOR BARX1) - MUS MUSC
   P91626           LADYBIRD LATE HOMEODOMAIN TRANSCRIPTION FACTOR - DROSOPHILA 
   Q21061           HOMEOBOX PROTEIN - CAENORHABDITIS ELEGANS.
   EGL5_CAEEL       HOMEOBOX PROTEIN EGL-5 (HOMEOBOX PROTEIN CEH-11) - CAENORHAB
   Q26604           HOMEOBOX PROTEIN SMOX-5 - SCHISTOSOMA MANSONI (BLOOD FLUKE).
   P91625           LADYBIRD EARLY HOMEODOMAIN TRANSCRIPTION FACTOR - DROSOPHILA
   O88181           HOMEOBOX PROTEIN B-H1 (HOMEOBOX PROTEIN MBH1) - RATTUS NORVE
   Q24256           HOMEOBOX PROTEIN B-H2 (HOMEOBOX PROTEIN BARH2) - DROSOPHILA 
   Q24257           HOMEOBOX PROTEIN B-H2 (HOMEOBOX PROTEIN BARH2) - DROSOPHILA 
   YL15_CAEEL       HYPOTHETICAL 26.3 KD HOMEOBOX PROTEIN C02F12.5 IN CHROMOSOME
   VAB7_CAEEL       HOMEOBOX PROTEIN VAB-7 - CAENORHABDITIS ELEGANS.
   LBX1_MOUSE       TRANSCRIPTION FACTOR LBX1 - MUS MUSCULUS (MOUSE).
   LBX1_HUMAN       TRANSCRIPTION FACTOR LBX1 - HOMO SAPIENS (HUMAN).
   O09113           HOMEOBOX PROTEIN ORTHOPEDIA - MUS MUSCULUS (MOUSE).
   O42115           ARX HOMEOPROTEIN - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANI
   O35085           HOMEOBOX PROTEIN ARX - MUS MUSCULUS (MOUSE).
   HM1D_DROAN       HOMEOBOX PROTEIN OM(1D) - DROSOPHILA ANANASSAE (FRUIT FLY).
   P79738           HOMEODOMAIN-CONTAINING PROTEIN - BRACHYDANIO RERIO (ZEBRAFIS
   ANF1_CHICK       HOMEOBOX PROTEIN ANF-1 (GANF) - GALLUS GALLUS (CHICKEN).
   P79681           HOMEODOMAIN-CONTAINING PROTEIN - ACIPENSER BAERI.
   ANF1_XENLA       HOMEOBOX PROTEIN ANF-1 (XANF-1) - XENOPUS LAEVIS (AFRICAN CL
   ANF2_XENLA       HOMEOBOX PROTEIN ANF-2 (XANF-2) - XENOPUS LAEVIS (AFRICAN CL
   Q24357           HOMEODOMAIN-CONTAINING PROTEIN - DROSOPHILA MELANOGASTER (FR
   O93367           HOMEOBOX PROTEIN HOX-11L2 (HOMEOBOX TLX-3) - GALLUS GALLUS (
   O93366           HOMEOBOX PROTEIN HOX-11 (HOMEOBOX TLX-1) - GALLUS GALLUS (CH
   O55144           HOMEOBOX PROTEIN HOX-11L2 (T-CELL LEUKEMIA HOMEOBOX 3) (HOME
   O43711           HOMEOBOX PROTEIN HOX-11L2 - HOMO SAPIENS (HUMAN).
   HX11_MOUSE       HOMEOBOX PROTEIN HOX-11 (T-CELL LEUKEMIA HOMEOBOX 1) (HOMEOB
   HX11_HUMAN       HOMEOBOX PROTEIN HOX-11 (TCL-3 PROTO-ONCOGENE) - HOMO SAPIEN
   O43763           HOMEOBOX PROTEIN HOX-11L1 - HOMO SAPIENS (HUMAN).
   Q61663           HOMEOBOX PROTEIN HOX-11L1 (T-CELL LEUKEMIA HOMEOBOX 2) (HOME
   DBX_MOUSE        HOMEOBOX PROTEIN DBX - MUS MUSCULUS (MOUSE).
   O76971           HOMEOBOX PROTEIN ORTHOPEDIA-RELATED (PLOTP) - PARACENTROTUS 
   O00412           PROTEIN SHOXA - HOMO SAPIENS (HUMAN).
   O00413           PROTEIN SHOXB - HOMO SAPIENS (HUMAN).
   O15266           SHOXA PROTEIN - HOMO SAPIENS (HUMAN).
   O15267           SHOXB PROTEIN - HOMO SAPIENS (HUMAN).
   O35749           PRX3A PROTEIN - RATTUS NORVEGICUS (RAT).
   O35750           PRX3A" PROTEIN - RATTUS NORVEGICUS (RAT).
   O60465           HOMEODOMAIN PROTEIN - HOMO SAPIENS (HUMAN).
   O60902           HOMEOBOX PROTEIN SHOTA - HOMO SAPIENS (HUMAN).
   O60903           HOMEOBOX PROTEIN SHOTB - HOMO SAPIENS (HUMAN).
   O73678           MEDAKA OG-12 - ORYZIAS LATIPES (MEDAKA FISH).
   P70390           OG12 HOMEOBOX PROTEIN (OG-12A HOMEODOMAIN PROTEIN) - MUS MUS
   HM30_CAEEL       HOMEOBOX PROTEIN CEH-30 - CAENORHABDITIS ELEGANS.
   Q24477           REVERSED POLARITY - DROSOPHILA MELANOGASTER (FRUIT FLY).
   Q62798           HOMEOBOX PROTEIN DRG11 - RATTUS NORVEGICUS (RAT).
   O62545           PRDL-A GENE - HYDRA ATTENUATA (HYDRA) (HYDRA VULGARIS).
   O14813           ARIX HOMEODOMAIN PROTEIN - HOMO SAPIENS (HUMAN).
   O35690           PAIRED MESODERM HOMEOBOX PROTEIN 2B (PAIRED-LIKE HOMEOBOX 2B
   Q62066           PAIRED MESODERM HOMEOBOX PROTEIN 2A (PAIRED-LIKE HOMEOBOX 2A
   Q62782           ARISTALESS HOMEOBOX PROTEIN HOMOLOG (ARIX1 HOMEODOMAIN PROTE
   Q99453           NBPHOX - HOMO SAPIENS (HUMAN).
   Q06453           HOMEOBOX PROTEIN ARISTALESS - DROSOPHILA MELANOGASTER (FRUIT
   O18400           PITUITARY HOMEOBOX 1 HOMOLOG (D-PTX1) - DROSOPHILA MELANOGAS
   O60578           PITUITARY HOMEOBOX 2 (RIEG BICOID-RELATED HOMEOBOX TRANSCRIP
   O60579           PITUITARY HOMEOBOX 2 (RIEG BICOID-RELATED HOMEOBOX TRANSCRIP
   O60580           PITUITARY HOMEOBOX 2 (RIEG BICOID-RELATED HOMEOBOX TRANSCRIP
   O70336           PITUITARY HOMEOBOX 2 (ORTHODENTICLE-LIKE HOMEOBOX 2) (SOLURS
   O75364           PITUITARY HOMEOBOX 3 (HOMEOBOX PROTEIN PITX3) - HOMO SAPIENS
   O93385           PITUITARY HOMEOBOX 2 (CPITX2) - GALLUS GALLUS (CHICKEN).
   O93396           HOMEODOMAIN TRANSCRIPTION FACTOR PITX2 - XENOPUS LAEVIS (AFR
   PIX2_HUMAN       PITUITARY HOMEOBOX 2 (RIEG BICOID-RELATED HOMEOBOX TRANSCRIP
   PIX2_MOUSE       PITUITARY HOMEOBOX 2 (ORTHODENTICLE-LIKE HOMEOBOX 2) (SOLURS
   PIX3_MOUSE       PITUITARY HOMEOBOX 3 (HOMEOBOX PROTEIN PITX3) - MUS MUSCULUS
   Q21836           R08B4.2 PROTEIN - CAENORHABDITIS ELEGANS.
   PIX1_HUMAN       PITUITARY HOMEOBOX 1 (HINDLIMB EXPRESSED HOMEOBOX PROTEIN BA
   PIX1_MOUSE       PITUITARY HOMEOBOX 1 (HOMEOBOX PROTEIN P-OTX) (PITUITARY OTX
   O01874           SIMILAR TO HOMEOBOX PROTEIN - CAENORHABDITIS ELEGANS.
   PIX3_RAT         PITUITARY HOMEOBOX 3 (HOMEOBOX PROTEIN PTX3) - RATTUS NORVEG
   UN30_CAEEL       HOMEOBOX PROTEIN UNC-30 - CAENORHABDITIS ELEGANS.
   Q06348           PAIRED MESODERM HOMEOBOX PROTEIN 2 (PRX-2) (HOMEOBOX PROTEIN
   HMOC_DROME       HOMEOTIC PROTEIN ORTHODENTICLE (OCELLILESS PROTEIN) - DROSOP
   O45024           AMPHIOXUS OTX TRANSCRIPTION FACTOR - BRANCHIOSTOMA FLORIDAE 
   O46033           OTX/ORTHODENTICLE RELATED HOMEOPROTEIN - HALOCYNTHIA RORETZI
   O46169           ORTHODENTICLE-1 PROTEIN - TRIBOLIUM CASTANEUM (RED FLOUR BEE
   O46170           ORTHODENTICLE-2 PROTEIN - TRIBOLIUM CASTANEUM (RED FLOUR BEE
   O61282           ORTHODENTICLE-RELATED PROTEIN - HEMICENTROTUS PULCHERRIMUS (
   O93488           LJOTXA - LAMPETRA JAPONICA (JAPANESE LAMPREY).
   O93489           LJOTXB - LAMPETRA JAPONICA (JAPANESE LAMPREY).
   OTX1_BRARE       HOMEOBOX PROTEIN OTX1 (ZOTX1) - BRACHYDANIO RERIO (ZEBRAFISH
   OTX1_HUMAN       HOMEOBOX PROTEIN OTX1 - HOMO SAPIENS (HUMAN).
   OTX1_MOUSE       HOMEOBOX PROTEIN OTX1 - MUS MUSCULUS (MOUSE).
   OTX1_RAT         HOMEOBOX PROTEIN OTX1 - RATTUS NORVEGICUS (RAT).
   OTX2_BRARE       HOMEOBOX PROTEIN OTX2 (ZOTX2) - BRACHYDANIO RERIO (ZEBRAFISH
   OTX2_HUMAN       HOMEOBOX PROTEIN OTX2 - HOMO SAPIENS (HUMAN).
   OTX2_MOUSE       HOMEOBOX PROTEIN OTX2 - MUS MUSCULUS (MOUSE).
   OTX2_XENLA       HOMEOBOX PROTEIN OTX2 (XOTX2) (ORTHODENTICLE 2) - XENOPUS LA
   OTX3_BRARE       HOMEOBOX PROTEIN OTX3 (ZOTX3) - BRACHYDANIO RERIO (ZEBRAFISH
   OTX_STRPU        HOMEOBOX PROTEIN OTX (SPOTX) - STRONGYLOCENTROTUS PURPURATUS
 
   HXAB_CHICK       HOMEOBOX PROTEIN HOX-A11 (GHOX-1I) (CHOX-1.9) - GALLUS GALLU
   HXDB_NOTVI       HOMEOBOX PROTEIN HOX-D11 (NVHOX-2) - NOTOPHTHALMUS VIRIDESCE
   HXDB_MOUSE       HOMEOBOX PROTEIN HOX-D11 (HOX-4.6) (HOX-5.5) - MUS MUSCULUS 
   HXDB_CHICK       HOMEOBOX PROTEIN HOX-D11 (CHOX-4.6) (GHOX-4.6) (CHOX-4E) - G
   HXCB_HUMAN       HOMEOBOX PROTEIN HOX-C11 - HOMO SAPIENS (HUMAN).
   HXAB_MOUSE       HOMEOBOX PROTEIN HOX-A11 (HOX-1.9) - MUS MUSCULUS (MOUSE).
   O08656           HOMEOBOX PROTEIN HOX-A1 - RATTUS NORVEGICUS (RAT).
   Q90470           HOXD11 - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANIO).
   Q90263           EMX1 HOMEOPROTEIN - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DAN
   Q90264           EMX2 HOMEOPROTEIN - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DAN
   P92042           CN-EMS PROTEIN - HYDRACTINIA SYMBIOLONGICARPUS.
   Q18513           PAL-1 PROTEIN - CAENORHABDITIS ELEGANS.
   PAL1_CAEEL       HOMEOBOX PROTEIN PAL-1 (HOMEOBOX PROTEIN CEH-3) - CAENORHABD
   O88880           VENTRAL ANTERIOR HOMEOBOX-CONTAINING PROTEIN 1 - MUS MUSCULU
   O93528           HOMEOBOX PROTEIN - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
   HMES_DROME       EMPTY SPIRACLES HOMEOTIC PROTEIN - DROSOPHILA MELANOGASTER (
   YRM6_CAEEL       HYPOTHETICAL 46.4 KD HOMEOBOX PROTEIN R06F6.6 IN CHROMOSOME 
   Q06615           HOMEOBOX PROTEIN XNOT - XENOPUS LAEVIS (AFRICAN CLAWED FROG)
   Q91770           HOMEOBOX PROTEIN - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
   HXDC_CHICK       HOMEOBOX PROTEIN HOX-D12 (CHOX-4.7) (CHOX-4F) - GALLUS GALLU
   HXDC_MOUSE       HOMEOBOX PROTEIN HOX-D12 (HOX-4.7) (HOX-5.6) - MUS MUSCULUS 
   Q91967           HOMEODOMAIN PROTEIN - GALLUS GALLUS (CHICKEN).
   HXDC_BRARE       HOMEOBOX PROTEIN HOX-D12 - BRACHYDANIO RERIO (ZEBRAFISH) (ZE
   Q90461           HOMEOBOX PROTEIN - BRACHYDANIO RERIO (ZEBRAFISH) (ZEBRA DANI
   O17588           C16C2.1 PROTEIN - CAENORHABDITIS ELEGANS.
   O93287           HOMEOBOX TRANSCRIPTION FACTOR - AMBYSTOMA MEXICANUM (AXOLOTL
   HEX1_MOUSE       ANTERIOR-RESTRICTED HOMEOBOX PROTEIN (RATHKE POUCH HOMEO BOX
   HXAD_HUMAN       HOMEOBOX PROTEIN HOX-A13 (HOX-1J) - HOMO SAPIENS (HUMAN).
   HXAD_MOUSE       HOMEOBOX PROTEIN HOX-A13 (HOX-1.10) - MUS MUSCULUS (MOUSE).
   HXDD_BRARE       HOMEOBOX PROTEIN HOX-D13 - BRACHYDANIO RERIO (ZEBRAFISH) (ZE
   HXDD_MOUSE       HOMEOBOX PROTEIN HOX-D13 (HOX-4.8) - MUS MUSCULUS (MOUSE).
   HXDD_HUMAN       HOMEOBOX PROTEIN HOX-D13 (HOX-4I) - HOMO SAPIENS (HUMAN).
   HXDD_CHICK       HOMEOBOX PROTEIN HOX-D13 (CHOX-4.8) (CHOX-4G) - GALLUS GALLU
   Q98911           HOMEOBOX PROTEIN - GALLUS GALLUS (CHICKEN).
   HM23_CAEEL       HOMEOBOX PROTEIN CEH-23 - CAENORHABDITIS ELEGANS.
   O46118           DNA-BINDING PROTEIN - DUGESIA TIGRINA (PLANARIAN).
   O54817           EXTRAEMBRYONIC, SPERMATOGENESIS, HOMEOBOX 1 (PAIRED-LIKE HOM
   O88933           HOMEOBOX PROTEIN SPX1 - MUS MUSCULUS (MOUSE).
   HXBD_HUMAN       HOMEOBOX PROTEIN HOX-B13 - HOMO SAPIENS (HUMAN).
   HXBD_MOUSE       HOMEOBOX PROTEIN HOX-B13 - MUS MUSCULUS (MOUSE).
   O35137           ARISTALESS 4 (PAIRED-TYPE HOMEODOMAIN TRANSCRIPTION FACTOR) 
   O70137           ARISTALESS 3 (PROLINE-RICH TRANSCRIPTION FACTOR ALX3) - MUS 
   O93582           PAIRED TYPE HOMEODOMAIN PROTEIN - GALLUS GALLUS (CHICKEN).
   Q60535           ALX3 - MESOCRICETUS AURATUS (GOLDEN HAMSTER).
   CRT1_HUMAN       CARTILAGE HOMEOPROTEIN 1 (CART-1) - HOMO SAPIENS (HUMAN).
   CRT1_XENLA       CARTILAGE HOMEOPROTEIN 1 (CART-1) (XCART1) - XENOPUS LAEVIS 
   CRT1_RAT         CARTILAGE HOMEOPROTEIN 1 (CART-1) - RATTUS NORVEGICUS (RAT).
   HPR1_CHICK       PAIRED MESODERM HOMEOBOX PROTEIN 1 (HOMEOBOX PROTEIN MHOX) (
   Q91368           PAIRED MESODERM HOMEOBOX PROTEIN 1 (HOMEOBOX PROTEIN MHOX) (
   PMX1_MOUSE       PAIRED MESODERM HOMEOBOX PROTEIN 1 (HOMEOBOX PROTEIN MHOX) (
   O60807           PAIRED MESODERM HOMEOBOX PROTEIN 1 (HOMEOBOX PROTEIN PHOX1) 
   UNC4_CAEEL       HOMEOBOX PROTEIN UNC-4 (HOMEOBOX PROTEIN CEH-4) - CAENORHABD
   P97830           PAIRED-TYPE HOMEODOMAIN TRANSCRIPTION FACTOR - RATTUS NORVEG
   O08934           UNC4.1 HOMEOBOX (C. ELEGANS) (TRANSCRIPTIONAL CONTROL FACTOR
   Q20455           F58E6.10 PROTEIN - CAENORHABDITIS ELEGANS.
   O93534           HOMEOBOX PROTEIN BIX2 - XENOPUS LAEVIS (AFRICAN CLAWED FROG)
   O57407           HOMEOBOX PROTEIN - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
   O46035           HOMEBOX PROTEIN DRX - DROSOPHILA MELANOGASTER (FRUIT FLY).
   O42567           RETINAL HOMEOBOX 2A - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
   O42566           RETINAL HOMEOBOX 1A - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
   O42358           RETINAL HOMEOBOX PROTEIN - BRACHYDANIO RERIO (ZEBRAFISH) (ZE
   O42357           RETINAL HOMEOBOX PROTEIN - BRACHYDANIO RERIO (ZEBRAFISH) (ZE
   O42201           RETINAL HOMEOBOX 1 - XENOPUS LAEVIS (AFRICAN CLAWED FROG).
   O35602           RETINAL HOMEOBOX PROTEIN - MUS MUSCULUS (MOUSE).
   O08748           PAIRED-TYPE HOMEOBOX (RAX) - MUS MUSCULUS (MOUSE).
   O93407           HOMEODOMAIN PROTEIN MIX.3 - XENOPUS LAEVIS (AFRICAN CLAWED F
   O73867           MIX-LIKE ENDODERMAL REGULATOR - XENOPUS LAEVIS (AFRICAN CLAW
   MIX2_XENLA       HOMEOBOX PROTEIN MIX.2 - XENOPUS LAEVIS (AFRICAN CLAWED FROG
   MIX1_XENLA       HOMEOBOX PROTEIN MIX.1 - XENOPUS LAEVIS (AFRICAN CLAWED FROG
   Q22459           SIMILAR TO HOMEOBOX DNA-BINDING DOMAIN OF PAIRED-TYPE HOMEOB
   HAT1_ARATH       HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT1 (HD-ZIP PROTEIN 1) - AR
   PRH1_MOUSE       HOMEOBOX PROTEIN PROPHET OF PIT-1 (PROP-1) (PITUITARY SPECIF
   PRH1_HUMAN       HOMEOBOX PROTEIN PROPHET OF PIT-1 (PROP-1) (PITUITARY SPECIF
   HM08_CAEEL       HOMEOBOX PROTEIN CEH-8 - CAENORHABDITIS ELEGANS.
   O93536           HOMEOBOX PROTEIN BIX4 - XENOPUS LAEVIS (AFRICAN CLAWED FROG)
   HGL2_ARATH       HOMEOBOX PROTEIN GLABRA2 (HOMEOBOX-LEUCINE ZIPPER PROTEIN AT
   Q39948           HOMEODOMAIN PROTEIN 1 - HELIANTHUS ANNUUS (COMMON SUNFLOWER)
   O23208           HOMEODOMAIN PROTEIN - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS)
   O15499           GSC-2 - HOMO SAPIENS (HUMAN).
   ATH5_ARATH       HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-5 (HD-ZIP PROTEIN ATHB-
   Q43427           DNA-BINDING PROTEIN - DAUCUS CAROTA (CARROT).
   CRX_MOUSE        CONE-ROD HOMEOBOX PROTEIN - MUS MUSCULUS (MOUSE).
   CRX_HUMAN        CONE-ROD HOMEOBOX PROTEIN - HOMO SAPIENS (HUMAN).
   HAT9_ARATH       HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9 (HD-ZIP PROTEIN 9) - AR
   Q42437           HD-ZIP PROTEIN - LYCOPERSICON ESCULENTUM (TOMATO).
   O82763           HOMEOBOX PROTEIN, HAT9 - ARABIDOPSIS THALIANA (MOUSE-EAR CRE
   O65769           HOMEODOMAIN LEUCINE ZIPPER PROTEIN - CRATEROSTIGMA PLANTAGIN
   HT22_ARATH       HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT22 (HD-ZIP PROTEIN 22) - 
   Q40782           HOMEOBOX-LEUCINE ZIPPER PROTEIN - PIMPINELLA BRACHYCARPA.
   Q40781           HOMEOBOX-LEUCINE ZIPPER PROTEIN - PIMPINELLA BRACHYCARPA.
   Q40780           HOMEOBOX-LEUCINE ZIPPER PROTEIN - PIMPINELLA BRACHYCARPA.
   ATH4_ARATH       HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-4 (HD-ZIP PROTEIN ATHB-
   Q43425           DNA-BINDING PROTEIN - DAUCUS CAROTA (CARROT).
   Q39862           HOMEOBOX-LEUCINE ZIPPER PROTEIN - GLYCINE MAX (SOYBEAN).
   HAT4_ARATH       HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT4 (HD-ZIP PROTEIN 4) (HD-
   HAT7_ARATH       HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT7 (HD-ZIP PROTEIN 7) (HD-
   Q43529           HOMEOBOX - LYCOPERSICON ESCULENTUM (TOMATO).
   Q43428           DNA-BINDING PROTEIN - DAUCUS CAROTA (CARROT).
   Q43426           DNA-BINDING PROTEIN - DAUCUS CAROTA (CARROT).
   Q39941           HOMEODOMAIN CONTAINING PROTEIN (HAHB-1) - HELIANTHUS ANNUUS 
   O65770           HOMEODOMAIN LEUCINE ZIPPER PROTEIN - CRATEROSTIGMA PLANTAGIN
   Q39927           HOMEODOMAIN PROTEIN - HELIANTHUS ANNUUS (COMMON SUNFLOWER).
   HAT5_ARATH       HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5 (HD-ZIP PROTEIN 5) (HD-
   ATH6_ARATH       HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6 (HD-ZIP PROTEIN ATHB-
   P93041           HOMEODOMAIN PROTEIN AHDP - ARABIDOPSIS THALIANA (MOUSE-EAR C
   ATH7_ARATH       HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-7 (HD-ZIP PROTEIN ATHB-
   HOY1_YARLI       HOMEOBOX PROTEIN HOY1 - YARROWIA LIPOLYTICA (CANDIDA LIPOLYT
   O77238           EYEGONE - DROSOPHILA MELANOGASTER (FRUIT FLY).
   O04554           T7N9.7 - ARABIDOPSIS THALIANA (MOUSE-EAR CRESS).
   O43812           DUX1 PROTEIN - HOMO SAPIENS (HUMAN).
   O18381           PAIRED BOX PROTEIN PAX-6 (EY) - DROSOPHILA MELANOGASTER (FRU
   GSBD_DROME       GOOSEBERRY DISTAL PROTEIN (BSH9) - DROSOPHILA MELANOGASTER (
   O01996           Y53C12C.1 PROTEIN - CAENORHABDITIS ELEGANS.
   O42349           PAX7 PROTEIN - GALLUS GALLUS (CHICKEN).
   PAX7_HUMAN       PAIRED BOX PROTEIN PAX-7 (HUP1) - HOMO SAPIENS (HUMAN).
   O57420           TRANSCRIPTION FACTOR PAX7E - BRACHYDANIO RERIO (ZEBRAFISH) (
   O57419           TRANSCRIPTION FACTOR PAX7D - BRACHYDANIO RERIO (ZEBRAFISH) (
   O57418           TRANSCRIPTION FACTOR PAX7C - BRACHYDANIO RERIO (ZEBRAFISH) (
   P91739           PAX-37 - HALOCYNTHIA RORETZI (SEA SQUIRT).
   HMPR_DROME       SEGMENTATION PROTEIN PAIRED - DROSOPHILA MELANOGASTER (FRUIT
   Q12785           PAX3 PROTEIN-FORKHEAD TRANSCRIPTION FACTOR FUSION - HOMO SAP
   PAX3_MOUSE       PAIRED BOX PROTEIN PAX-3 - MUS MUSCULUS (MOUSE).
   PAX3_HUMAN       PAIRED BOX PROTEIN PAX-3 (HUP2) - HOMO SAPIENS (HUMAN).
   O57416           TRANSCRIPTION FACTOR PAX3 - BRACHYDANIO RERIO (ZEBRAFISH) (Z
   O17978           R03C1.3 PROTEIN - CAENORHABDITIS ELEGANS.
   GSBP_DROME       GOOSEBERRY PROXIMAL PROTEIN (BSH4) - DROSOPHILA MELANOGASTER
   Q14333           FACIOSCAPULOHUMERAL MUSCULAR DYSTROPHY (FSHD) GENE REGION, D

SCAN HISTORY OWL20_0 7 2000 NSINGLE OWL26_0 3 2000 NSINGLE SPTR37_9f 3 720 NSINGLE INITIAL MOTIF SETS HOMEOBOX1 Length of motif = 12 Motif number = 1 Homeobox motif I - 1 PCODE ST INT NRYLTRRRRIEI HM11_MOUSE 151 151 NRYLTRRRRIEI HM12_MOUSE 41 41 NRYLTRRRRIEI HM13_HUMAN 217 217 NRYLTRRRRIEI HM13_MOUSE 217 217 NRYLTRRRRIEI HM14_CHICK 231 231 NRYLTRRRRIEI HM14_HUMAN 237 237 NRYLTRRRRIEI HM1_XENLA 163 163 NRYLTRRRRIEI HM21_BRARE 222 222 NRYLTRRRRIEI HM21_CHICK 29 29 NRYLTRRRRIEI HM21_HUMAN 65 65 HOMEOBOX2 Length of motif = 11 Motif number = 2 Homeobox motif II - 1 PCODE ST INT LCLTERQIKIW HM11_MOUSE 166 3 LCLTERQIKIW HM12_MOUSE 56 3 LCLSERQIKIW HM13_HUMAN 232 3 LCLSERQIKIW HM13_MOUSE 232 3 LCLSERQVKIW HM14_CHICK 246 3 LCLSERQVKIW HM14_HUMAN 252 3 LCLTERQIKIW HM1_XENLA 178 3 LCLSERQIKIW HM21_BRARE 237 3 LCLSERQIKIW HM21_CHICK 44 3 LCLSERQIKIW HM21_HUMAN 80 3 HOMEOBOX3 Length of motif = 10 Motif number = 3 Homeobox motif III - 1 PCODE ST INT WFQNRRMKWK HM11_MOUSE 176 -1 WFQNRRMKWK HM12_MOUSE 66 -1 WFQNRRMKWK HM13_HUMAN 242 -1 WFQNRRMKWK HM13_MOUSE 242 -1 WFQNRRMKWK HM14_CHICK 256 -1 WFQNRRMKWK HM14_HUMAN 262 -1 WFQNRRMKWK HM1_XENLA 188 -1 WFQNRRMKWK HM21_BRARE 247 -1 WFQNRRMKWK HM21_CHICK 54 -1 WFQNRRMKWK HM21_HUMAN 90 -1 FINAL MOTIF SETS HOMEOBOX1 Length of motif = 12 Motif number = 1 Homeobox motif I - 3 PCODE ST INT NRYLTRRRRIEL HMB1_STRPU 212 212 NRYLTRRRRIEI HB7A_XENLA 162 162 NRYLTRRRRIEI HB7B_XENLA 160 160 NRYLTRRRRIEI HMAN_DROME 319 319 NRYLTRRRRIEI HXA7_HUMAN 152 152 NRYLTRRRRIEI HXA7_MOUSE 151 151 NRYLTRRRRIEI HXA7_XENLA 144 144 NRYLTRRRRIEI HXB6_BRARE 172 172 NRYLTRRRRIEI HXB6_HUMAN 168 168 NRYLTRRRRIEI HXB6_MOUSE 168 168 NRYLTRRRRIEI HXB7_HUMAN 159 159 NRYLTRRRRIEI HXB7_MOUSE 159 159 NRYLTRRRRIEI HXC6_HUMAN 81 81 NRYLTRRRRIEI HXC6_MOUSE 163 163 NRYLTRRRRIEI HXC6_SHEEP 81 81 NRYLTRRRRIEI HXC6_XENLA 163 163 NRYLTRRRRIEI O42504 162 162 NRYLTRRRRIEI O43368 152 152 NRYLTRRRRIEI O76760 302 302 NRYLTRRRRIEI O76761 266 266 NRYLTRRRRIEI Q17188 200 200 NRYLTRRRRIEI Q24508 346 346 NRYLTRRRRIEI Q24645 335 335 NRYLTRRRRIEI Q25213 236 236 NRYLTRRRRIEI Q26469 269 269 NRYLTRRRRIEI Q64078 23 23 NRYLTRRRRIEI Q64081 23 23 NRYLTRRRRIEI SCR_DROME 344 344 NRYLTRRRRIEI O43366 237 237 NRYLTRRRRIEI HXA4_MOUSE 202 202 NRYLTRRRRIEI HXA4_HUMAN 237 237 NRYLTRRRRIEI HXA4_CHICK 231 231 NRYLTRRRRIEV O18313 164 164 NKYLTRRRRIEI O76939 248 248 NKYLTRRRRIEI O76937 195 195 NRYLTRRRRIEY HXA7_COTJA 151 151 NRYLTRRRRIEI O43367 217 217 NRYLTRRRRIEI HXD4_MOUSE 174 174 NRYLTRRRRIEI HXD4_HUMAN 176 176 NRYLTRRRRIEI HXD4_CHICK 166 166 NRYLTRRRRIEI HXC4_MOUSE 178 178 NRYLTRRRRIEI HXC4_HUMAN 178 178 NRYLTRRRRIEI HXB5_MOUSE 216 216 NRYLTRRRRIEI HXB5_HUMAN 216 216 NRYLTRRRRIEI HXB5_BRARE 222 222 NRYLTRRRRIEI HXA5_MOUSE 217 217 NRYLTRRRRIEI HXA5_HUMAN 217 217 NPYLTRKRRIEV Q64082 23 23 NPYLTRKRRIEV HXD8_CHICK 117 117 NPYLTRKRRIEV HXC8_MOUSE 171 171 NPYLTRKRRIEV HXB8_MOUSE 168 168 NRYLTRKRRIEI Q26445 131 131 NRYLTRRRRIEI HMDF_DROME 388 388 NRYLTRRRRIEI P92161 255 255 NRYLTRRRRIEI HXC5_MOUSE 177 177 NRYLTRRRRIEI HXC5_HUMAN 177 177 NRYLTRRRRIEI HXC5_BRARE 187 187 NRYLTRRRRVEI HXB4_CHICK 172 172 NRYLTRRRRVEI O13074 185 185 NRYLTRRRRVEI HXB4_MOUSE 183 183 NRYLTRRRRVEI HXB4_HUMAN 184 184 NKYLTRRRRIEI Q26868 205 205 NRYLTRRRRVEI HXB4_XENLA 163 163 NPYLTRKRRIEV O42503 247 247 NHYLTRRRRIEI O76762 160 160 NHYLTRRRRIEI HMAA_DROME 420 420 NRYLTRARRIEI HMLA_DROME 529 529 NPYLTRKRRIEV HXD8_MOUSE 217 217 NKYLTRARRIEI O46127 63 63 NRYLTRARRVEI Q24782 162 162 NKYLARTRRIEI HMZ2_DROME 65 65 NRYLTRRRRIEI HXC6_NOTVI 163 163 NRYLTRRRRIES O57374 188 188 NKYLTRKRRIEI O61575 138 138 NMYLTRDRRYEV HXA9_HUMAN 227 227 NMYLTRDRRYEV HXC9_MOUSE 214 214 NMYLTRDRRYEV HXD9_HUMAN 297 297 NMYLTRDRRYEV HXD9_MOUSE 294 294 NMYLTRDRRYEV O43369 228 228 NMYLTRDRRYEV O43429 228 228 NMYLTRDRRYEV O70154 227 227 NMYLTRDRRYEV O75805 154 154 NMYLTRDRRYEV O75806 224 224 NMYLTRDRRYEV Q60499 132 132 NMYLTRDRRYEV Q64083 23 23 NKYLTRARRIEI O76842 89 89 NMYLTRDRRFEV O42502 213 213 NRYLTRRRRIEI Q23990 344 344 NRYLCRPRRVEM HOX3_BRAFL 157 157 NRYLCRPRRVEM Q99955 216 216 NRYLCRPRRVEM Q64084 23 23 NRYLCRPRRVEM O93353 195 195 NRYLCRPRRVEM O43365 213 213 NTYLTRDRRYEV O42506 238 238 NRYLCRPRRVEM HXD3_MOUSE 201 201 NRYLCRPRRVEM HXD3_HUMAN 200 200 NRYLCRPRRVEM HXA3_MOUSE 214 214 NHYLTRRRRIEM HMUX_DROME 317 317 NHYLTRRRRIEM O76759 241 241 NHYLTRRRRIEM O76758 258 258 NHYLTRRRRIEM O44269 157 157 NKYLTRARRVEI HXA1_HUMAN 246 246 NKYLTRARRVEI HXA1_MOUSE 247 247 NKYLTRARRVEI O43363 251 251 NKYLCRPRRIEI HMPB_DROME 220 220 NKYLTRARRVEI Q25679 195 195 NHYLTRRRRIEI P91714 284 284 NKYLTRARRVEI HXB1_CHICK 235 235 NKYLTRARRVEI Q25131 116 116 HKYLTRKRRQEI MAB5_CAEEL 292 292 NKYLSRPKRFEV HB9_HUMAN 264 264 NKYLCRPRRVEI HXA2_CHICK 162 162 NKYLCRPRRVEI HXA2_MOUSE 161 161 NKYLCRPRRVEI HXA2_RAT 161 161 NKYLCRPRRVEI HXB2_HUMAN 165 165 NKYLCRPRRVEI O43364 165 165 NKYLCRPRRVEI O93365 180 180 NKYLSRARRVEI HXB1_HUMAN 225 225 NKYLSRARRVEI HXB1_MOUSE 221 221 NPYLTRKRRIEV O42139 185 185 NRYLCRPRRIEM O62523 232 232 HKYLTRKRRIEV LI39_CAEEL 187 187 NMYLTRDRRHEV HXB9_MOUSE 207 207 NMYLTRDRRHEV HXB9_XENLA 189 189 NKYLTRARRVEV HXA1_BRARE 230 230 NRYLCRPRRVEM HXB3_MOUSE 213 213 NRYLCRPRRVEM HXB3_HUMAN 210 210 NRYLCRPRRVEM HXB3_CHICK 181 181 NMYLTRDRRSKL O44936 216 216 NRYLSRLRRIQI Q25182 203 203 NRYLSRLRRIQI O17476 209 209 SKYLTRARRVEI HXB1_CYPCA 243 243 SKYLTRARRVEI O13073 308 308 NKYLTRARRIEI HXD1_MOUSE 250 250 NKYLTRARRIEI HXD1_XENLA 222 222 NKYLTRARRIEI Q91767 223 223 HNYLTRLRRYEI MOX2_HUMAN 208 208 HNYLTRLRRYEI MOX2_MOUSE 208 208 HNYLTRLRRYEI MOX2_RAT 208 208 HNYLTRLRRYEI MOX2_XENLA 203 203 NKYISRPRRVEL HM8_XENLA 169 169 NKYISRPRRVEL IPF1_HUMAN 168 168 NKYISRPRRVEL IPF1_MESAU 168 168 NKYISRPRRVEL IPF1_MOUSE 169 169 NKYISRPRRVEL IPF1_RAT 168 168 NKYISRPRRVEL O60594 168 168 NMYLYRTRRIEI HMZ1_DROSU 110 110 NMYLYRTRRIEI HMZ1_DROME 112 112 QRYLSTPERIEL Q19937 142 142 NMYLSRLRRIEI O93290 158 158 NMYLSRLRRIEI GSHI_MOUSE 168 168 NMYLSRLRRIEI GSH2_MOUSE 225 225 HNYLTRLRRYEL Q25144 185 185 SNYLTRLRRYEI Q26381 108 108 NKYISRPRRVEL O73726 159 159 NQYLTRRRRIEI O76938 142 142 QRYLSPPERVEL Q04787 154 154 QRYLSGPERSEM HMBP_DROME 197 197 KQYLSIAERAEF HMMC_BRARE 173 173 KQYLSIAERAEF HMX2_CHICK 156 156 KQYLSIAERAEF HMX2_COTJA 156 156 KQYLSIAERAEF HMX2_MOUSE 164 164 KQYLSIAERAEF O44937 200 200 QRYLSGPERADL P70061 224 224 QRYLSGPERADL O93590 122 122 QRYLSGPERADL O13090 169 169 QRYLSGPERADL HK32_MOUSE 228 228 HNYLTRLRRYEI MOX1_HUMAN 193 193 HNYLTRLRRYEI MOX1_MOUSE 192 192 QRYLSGPERAAL O13091 155 155 QKYLSAPERAHL HK31_MOUSE 147 147 QKYLSAPERAHL HK31_HUMAN 146 146 NKYLSRDRRVEF Q25186 183 183 NMYLTRERRLEI HXCA_MOUSE 290 290 KQYLSIAERAEF HMMA_BRARE 144 144 KQYLSIAERAEF HMX1_BOVIN 188 188 KQYLSIAERAEF HMX1_CHICK 144 144 KQYLSIAERAEF HMX1_HUMAN 188 188 KQYLSIAERAEF HMX1_MOUSE 188 188 KQYLSIAERAEF HMXX_CHICK 183 183 KQYLSIAERAEF MSX3_MOUSE 109 109 KQYLSIAERAEF Q90235 126 126 KQYLSIAERAEF Q90455 133 133 KQYLSIAERAEF HMSH_DROME 443 443 KQYLSIAERAEF Q24481 365 365 KQYLSIAERAEF YRN1_CAEEL 151 151 KRYLSSAERAGL O70218 213 213 NMYLTRERRLEI HXDA_HUMAN 288 288 NMYLTRERRLEI HXDA_MOUSE 288 288 NEYISRSRRFEL HMRO_DROME 213 213 NEYISRSRRFEL Q24487 35 35 KQYLSIAERAEF HMMD_BRARE 122 122 KRYLSSSERAGL Q90853 220 220 KRYLSSSERAGL O88699 249 249 KRYLSSSERAGL O57601 203 203 KRYLSSSERAGL HK51_MOUSE 351 351 NMYLTRERRLEI Q90469 280 280 SRYITREKRIEL Q24780 176 176 NMYLTRERRLEI O43605 341 341 NMYLTRERRLEI O43370 363 363 NMYLTRERRLEI HXAA_MOUSE 347 347 NMYLTRERRLEI HXAA_HUMAN 444 444 TRYLSVCERLNL HMN1_DROME 567 567 TRYLSVCERLNL SAX1_MOUSE 178 178 QRYLSAPEREHL HK23_MOUSE 167 167 QRYLSAPEREHL Q98871 164 164 QRYLSAPEREHL Q91863 173 173 QRYLSAPEREHL Q91862 171 171 QRYLSAPEREHL Q91861 178 178 QRYLSAPEREHL Q91623 178 178 QRYLSAPEREHL O73907 161 161 QRYLSAPEREHL O61286 392 392 NRYITRRRRIDI HMFT_DROME 279 279 QRYLTAPEREHL HK26_MOUSE 145 145 NMYLTRERRLEI O42505 111 111 TQYLALPERAEL HMDL_BRAFL 138 138 TQYLALPERAEL HMDL_DROME 146 146 KRYLSSAERAGL Q91964 149 149 TQYLALPERAEL DLX2_BRARE 145 145 TQYLALPERAEL DLX5_BRARE 147 147 TQYLALPERAEL DLX2_MOUSE 177 177 TQYLALPERAEL DLX2_HUMAN 174 174 NRYLTERRRQDL O76848 168 168 NRYITRRRRMDI HMFT_DROHY 305 305 NEYISRSRRFEL HMRO_DROVI 186 186 QRYVTATEREEL Q21169 147 147 AQYLALPERAEL DLX3_AMBME 148 148 AQYLALPERAEL DLX3_BRARE 147 147 AQYLALPERAEL DLX3_HUMAN 151 151 AQYLALPERAEL DLX3_MOUSE 151 151 AQYLALPERAEL DLX3_NOTVI 147 147 AQYLALPERAEL DLX3_PLEWA 148 148 AQYLALPERAEL HMD2_XENLA 152 152 QRYLSAPERDHL Q98873 146 146 QRYLSAPERDQL HK25_MOUSE 159 159 QRYLSAPERDQL HK25_HUMAN 160 160 KRYLSSQERSNL Q18532 87 87 NAYVSKQKRWEL HMAB_DROME 409 409 QKYLSAPERDHL HK25_CHICK 141 141 QKYLSAPERDHL Q98872 163 163 QKYLSAPERDHL O13160 163 163 QKYLSAPERDHL HK25_XENLA 146 146 KQYLSIAERAEF HMX2_HUMAN 164 164 QKYLSALEREHL O13005 86 86 QKYLSALEREHL O13053 86 86 SRYLTEKRRQEL HM16_CAEEL 125 125 QRYLSPAERDQL O35767 159 159 NRYLTERRRQQL Q26371 250 250 NRYLTERRRQQL HMEN_DROVI 508 508 NRYLTERRRQQL HMEN_DROME 476 476 SRYITIRRKAEL HMD1_CHICK 159 159 SRYITIRRKAEL Q91622 172 172 KQYLSIAERAEF Q91152 177 177 NRYITIRRKSEL CDX4_MOUSE 193 193 NRYITIRRKSEL Q90262 173 173 NRYITIRRKSEL Q90320 173 173 NRYLTERRRQSL HMEN_BOMMO 302 302 NRYLTERRRQSL HMIN_BOMMO 394 394 TQYLALPERAEL DLX4_BRARE 159 159 TQYLALPERAEL DLX1_BRARE 150 150 TQYLALPERAEL DLX6_BRARE 147 147 TQYLALPERAEL DLX1_MOUSE 150 150 TQYLALPERAEL DLX5_CHICK 158 158 TQYLALPERAEL HMD3_XENLA 159 159 TQYLALPERAEL DLX5_RAT 159 159 TQYLALPERAEL DLX5_MOUSE 159 159 KKYLSLTERSQI GBX2_CHICK 261 261 KKYLSLTERSQI GBX2_HUMAN 268 268 KKYLSLTERSQI GBX2_MOUSE 269 269 KKYLSLTERSQI GBX2_XENLA 261 261 KKYLSLTERSQI Q24136 341 341 SAYLCRNRRLEM H114_BRARE 167 167 NRYLTEKRRQQL HMIN_DROME 493 493 SRYITIRRKSEL CDX1_HUMAN 176 176 SRYITIRRKSEL CDX1_MOUSE 176 176 NRYLTERRRHTL Q25212 61 61 KKYLSASERTEM O61640 415 415 QRYLSAPEREQL O15522 106 106 QRYLSAPEREQL O70584 103 103 NRYLTEQRRQAL HME3_BRARE 194 194 NRYLTEKRRQTL HMEN_ANOGA 520 520 NRYLTEQRRQSL HME2_BRARE 198 198 NRYLTEQRRQSL HMED_XENLA 198 198 NRYLTEQRRQSL HME2_CHICK 221 221 DKYISRPRRVEL Q26449 32 32 NRYLTERRRQDL HMEN_ARTSF 271 271 NRYITIQRKSEL CDX4_HUMAN 195 195 QRYLGAPERKKL Q91926 151 151 DKYISRPRRLEL Q26451 44 44 TQYLALPERAEL HMD4_XENLA 149 149 NRYLTEQRRQDL P90688 181 181 NRYLTEQRRQSL HME2_HUMAN 265 265 NRYLTEQRRQSL HMEC_XENLA 198 198 NRYLTEQRRQSL HME2_MOUSE 257 257 SRYITIRRKAEL CDX2_HUMAN 206 206 SRYITIRRKAEL Q17243 142 142 SRYITIRRKAEL P79788 200 200 SRYITIRRKAEL CDX2_MESAU 207 207 QKYLSPPERKRL O13023 159 159 QKYLSPPERKRL HMPH_MOUSE 160 160 QKYLSPPERKRL HMPH_HUMAN 159 159 QKYLSPPERKRL HMPH_CHICK 166 166 NRYLDELRRKKL Q26601 445 445 SRYITIRRKSEL CDX2_MOUSE 207 207 QRYLGASERKKL O42173 151 151 DKYLSVNKRIQL YZQ6_CAEEL 116 116 KKYLTGAEREII HMTI_DROME 323 323 KKYLSSTERGEL Q24787 99 99 SRYITIRRKSEL HMCA_DROME 265 265 HKYLSPQERKKL Q21578 189 189 TQYLALPERAQL DLX7_MOUSE 138 138 QKYLSASERDQI O16132 201 201 QKYLSAPEREHL HMH2_DUGTI 155 155 QRYLSAPEREHL Q90481 147 147 QKYLSAPEREHL O77158 177 177 QRYLSAPEREHL HNK2_XENLA 91 91 QRYLSAPEREHL HK22_MOUSE 150 150 QRYLSAPEREHL HK22_MESAU 150 150 TQYLALPERADL DLX7_BRARE 151 151 TQYLALPERADL DLX8_BRARE 145 145 ENYVSRPRRCEL Q98863 191 191 ENYVSRPRRCEL HX3_XENLA 190 190 ENYVSRPRRCEL EVX2_MOUSE 213 213 ENYVSRPRRCEL EVX1_MOUSE 205 205 ENYVSRPRRCEL EVX1_HUMAN 205 205 TQYLALPDRAAL HMD1_CAEEL 124 124 QRYLSAPEREHL Q26436 567 567 QRYLSAPEREHL HMN2_DROME 566 566 ESYVSRPRRCEL Q90265 58 58 SRYITIRRKTEL Q91542 173 173 CQYVTRRRRIEL Q24781 190 190 TQYLALPERAEL HMD1_XENLA 147 147 HRYLGASERQKL Q91914 196 196 ENYVSRPRRCEL HMEV_DROME 92 92 ENYVSRPRRCEL P92067 93 93 ENYVSRPRRCEL O01353 91 91 HRYLGASERRKL Q91669 205 205 HRYLGASERRKL Q91893 206 206 HRYLGASERRKL Q91878 206 206 HRYLGASERRKL Q91877 205 205 QKYLSAPEREHL O14954 170 170 QKYLSAPEREHL TTF1_RAT 183 183 QKYLSAPEREHL TTF1_MOUSE 183 183 QKYLSAPEREHL TTF1_HUMAN 183 183 QKYLSAPEREHL TTF1_CANFA 183 183 QKYLSAPEREHL O14955 183 183 NRYITEQRRQTL HME1_HUMAN 324 324 NRYITEQRRQTL HME1_MOUSE 334 334 AKYLTAPEREQL Q93793 105 105 AKYLTAPEREQL O17319 167 167 AKYLTAPEREQL O17318 172 172 QKYLSAPEREHL O77058 298 298 QKYLSAPEREAL HM22_CAEEL 211 211 QKYVAKPERRKL HOX1_HALRO 667 667 ENYVSRPRRCEL O18325 83 83 TKYLAGPERARL O35762 259 259 TKYLAGPERARL Q60554 258 258 TKYLAGPERARL P78426 258 258 QKYLSVQERQEL Q24255 321 321 QKYLSVQERQEL Q23838 352 352 NRYITEQRRQSL HME1_CHICK 266 266 QKYLSTPDRLDL O08686 134 134 QKYLSTPDRLDL O43518 130 130 SRYITEQRRQAL HME1_BRARE 165 165 KKYLSAPEREHL HMH1_DUGTI 399 399 QKYITKPDRRKL HMH2_DROME 309 309 QKYVTKPDRKQL HLX1_HUMAN 298 298 QKYVTKPDRKQL HLX1_MOUSE 295 295 QKYLSTPDRIDL P70159 57 57 QKYLSPADRDEI P91626 273 273 SSYVSKKQREEL Q21061 134 134 SSYVSKKQREEL EGL5_CAEEL 129 129 QRYLTPTDRDRI Q26604 59 59 QKYLSPADRDEI P91625 375 375 QKYLSVQDRMDL O88181 251 251 QKYLSVQDRMEL Q24256 399 399 QKYLSVQDRMEL Q24257 397 397 NEYICKDRRGEL YL15_CAEEL 63 63 ENYVSRKTRGEL VAB7_CAEEL 90 90 QKYLSPADRDQI LBX1_MOUSE 146 146 QKYLSPADRDQI LBX1_HUMAN 146 146 THYPDIFMREEL O09113 126 126 THYPDVFTREEL O42115 237 237 THYPDVFTREEL O35085 352 352 QKYLSVQERQEL HM1D_DROAN 353 353 NSYPGIDIREEL P79738 102 102 NSYPGIDIREEL ANF1_CHICK 141 141 NPYPGIDVREEL P79681 116 116 NSYPGIDVREEL ANF1_XENLA 132 132 NSYPGIDVREEL ANF2_XENLA 128 128 QKYLASAERAAL Q24357 207 207 QKYLASAERAAL O93367 194 194 QKYLASAERAAL O93366 190 190 QKYLASAERAAL O55144 188 188 QKYLASAERAAL O43711 188 188 QKYLASAERAAL HX11_MOUSE 225 225 QKYLASAERAAL HX11_HUMAN 223 223 QKYLASAERAAL O43763 171 171 QKYLASAERAAL Q61663 179 179 QKYISKPDRKKL DBX_MOUSE 203 203 THYPDIFMREEI O76971 138 138 THYPDAFMREEL O00412 139 139 THYPDAFMREEL O00413 139 139 THYPDAFMREEL O15266 139 139 THYPDAFMREEL O15267 139 139 THYPDAFMREEL O35749 64 64 THYPDAFMREEL O35750 64 64 THYPDAFMREEL O60465 33 33 THYPDAFMREEL O60902 82 82 THYPDAFMREEL O60903 33 33 THYPDAFMREEL O73678 129 129 THYPDAFMREEL P70390 162 162 QKYLSVQDRMDL HM30_CAEEL 179 179 APYPDVFAREEL Q24477 326 326 THYPDVFTREEL Q62798 55 55 THYPDVFMREEL O62545 62 62 THYPDIYTREEL O14813 112 112 THYPDIYTREEL O35690 120 120 THYPDIYTREEL Q62066 112 112 THYPDIYTREEL Q62782 112 112 THYPDIYTREEL Q99453 120 120 THYPDVFTREEL Q06453 107 107 NRYPDMSTREEI O18400 290 290 NRYPDMSTREEI O60578 61 61 NRYPDMSTREEI O60579 107 107 NRYPDMSTREEI O60580 114 114 NRYPDMSTREEI O70336 114 114 NRYPDMSTREEI O75364 84 84 NRYPDMSTREEI O93385 123 123 NRYPDMSTREEI O93396 116 116 NRYPDMSTREEI PIX2_HUMAN 61 61 NRYPDMSTREEI PIX2_MOUSE 61 61 NRYPDMSTREEI PIX3_MOUSE 84 84 THYPDVFTREEL Q21836 139 139 NRYPDMSMREEI PIX1_HUMAN 111 111 NRYPDMSMREEI PIX1_MOUSE 112 112 THYPDIYTREEI O01874 171 171 NRYPDMSTREEI PIX3_RAT 84 84 NRYPDMACREEI UN30_CAEEL 134 134 THYPDAFVREEL Q06348 120 120 TRYPDIFMREEV HMOC_DROME 95 95 TRYPDIFMREEV O45024 78 78 TRYPDIFMREEV O46033 85 85 TRYPDIFMREEV O46169 149 149 TRYPDIFMREEV O46170 91 91 TRYPDIFMREEV O61282 153 153 TRYPDIFMREEV O93488 61 61 TRYPDIFMREEV O93489 58 58 TRYPDIFMREEV OTX1_BRARE 60 60 TRYPDIFMREEV OTX1_HUMAN 60 60 TRYPDIFMREEV OTX1_MOUSE 60 60 TRYPDIFMREEV OTX1_RAT 60 60 TRYPDIFMREEV OTX2_BRARE 60 60 TRYPDIFMREEV OTX2_HUMAN 60 60 TRYPDIFMREEV OTX2_MOUSE 60 60 TRYPDIFMREEV OTX2_XENLA 60 60 TRYPDIFMREEV OTX3_BRARE 60 60 TRYPDIFMREEV OTX_STRPU 153 153 HOMEOBOX2 Length of motif = 11 Motif number = 2 Homeobox motif II - 3 PCODE ST INT LGLTERQIKIW HMB1_STRPU 227 3 LCLTERQIKIW HB7A_XENLA 177 3 LCLTERQIKIW HB7B_XENLA 175 3 LCLTERQIKIW HMAN_DROME 334 3 LCLTERQIKIW HXA7_HUMAN 167 3 LCLTERQIKIW HXA7_MOUSE 166 3 LCLTERQIKIW HXA7_XENLA 159 3 LCLTERQIKIW HXB6_BRARE 187 3 LCLTERQIKIW HXB6_HUMAN 183 3 LCLTERQIKIW HXB6_MOUSE 183 3 LCLTERQIKIW HXB7_HUMAN 174 3 LCLTERQIKIW HXB7_MOUSE 174 3 LCLTERQIKIW HXC6_HUMAN 96 3 LCLTERQIKIW HXC6_MOUSE 178 3 LCLTERQIKIW HXC6_SHEEP 96 3 LCLTERQIKIW HXC6_XENLA 178 3 LCLTERQIKIW O42504 177 3 LCLTERQIKIW O43368 167 3 LCLTERQIKIW O76760 317 3 LCLTERQIKIW O76761 281 3 LCLTERQIKIW Q17188 215 3 LCLTERQIKIW Q24508 361 3 LCLTERQIKIW Q24645 350 3 LCLTERQIKIW Q25213 251 3 LCLTERQIKIW Q26469 284 3 LCLTERQIKIW Q64078 38 3 LCLTERQIKIW Q64081 38 3 LCLTERQIKIW SCR_DROME 359 3 LCLSERQVKIW O43366 252 3 LCLSERQVKIW HXA4_MOUSE 217 3 LCLSERQVKIW HXA4_HUMAN 252 3 LCLSERQVKIW HXA4_CHICK 246 3 LCLTERQIKIW O18313 179 3 LSLTERQIKIW O76939 263 3 LILTERQIKIW O76937 210 3 LCLTERQIKIW HXA7_COTJA 166 3 LCLSERQIKIW O43367 232 3 LCLSERQIKIW HXD4_MOUSE 189 3 LCLSERQIKIW HXD4_HUMAN 191 3 LCLSERQIKIW HXD4_CHICK 181 3 LCLSERQIKIW HXC4_MOUSE 193 3 LCLSERQIKIW HXC4_HUMAN 193 3 LCLSERQIKIW HXB5_MOUSE 231 3 LCLSERQIKIW HXB5_HUMAN 231 3 LCLSERQIKIW HXB5_BRARE 237 3 LCLSERQIKIW HXA5_MOUSE 232 3 LCLSERQIKIW HXA5_HUMAN 232 3 LGLTERQVKIW Q64082 38 3 LGLTERQVKIW HXD8_CHICK 132 3 LGLTERQVKIW HXC8_MOUSE 186 3 LGLTERQVKIW HXB8_MOUSE 183 3 LCLTERQIKIW Q26445 146 3 LVLSERQIKIW HMDF_DROME 403 3 LVLSERQIKIW P92161 270 3 LCLNERQIKIW HXC5_MOUSE 192 3 LCLNERQIKIW HXC5_HUMAN 192 3 LCLNERQIKIW HXC5_BRARE 202 3 LCLSERQIKIW HXB4_CHICK 187 3 LCLSERQIKIW O13074 200 3 LCLSERQIKIW HXB4_MOUSE 198 3 LCLSERQIKIW HXB4_HUMAN 199 3 LRLTERQIKIW Q26868 220 3 LRLSERQIKIW HXB4_XENLA 178 3 LSLTERQVKIW O42503 262 3 LCLTERQIKIW O76762 175 3 LCLTERQIKIW HMAA_DROME 435 3 LQLNETQVKIW HMLA_DROME 544 3 LALTERQVKIW HXD8_MOUSE 232 3 LGLNETQVKIW O46127 78 3 LKLTEAQIKIW Q24782 177 3 LALTERQVKIW HMZ2_DROME 80 3 SCLTERQIKIW HXC6_NOTVI 178 3 LSLSERQIKIW O57374 203 3 LMLSERQVKIW O61575 153 3 LNLTERQVKIW HXA9_HUMAN 242 3 LNLTERQVKIW HXC9_MOUSE 229 3 LNLTERQVKIW HXD9_HUMAN 312 3 LNLTERQVKIW HXD9_MOUSE 309 3 LNLTERQVKIW O43369 243 3 LNLTERQVKIW O43429 243 3 LNLTERQVKIW O70154 242 3 LNLTERQVKIW O75805 169 3 LNLTERQVKIW O75806 239 3 LNLTERQVKIW Q60499 147 3 LNLTERQVKIW Q64083 38 3 LQLNETQVKIW O76842 104 3 LNLTERQVKIW O42502 228 3 LCLTERQIKIW Q23990 359 3 LNLTERQIKIW HOX3_BRAFL 172 3 LNLTERQIKIW Q99955 231 3 LNLTERQIKIW Q64084 38 3 LNLTERQIKIW O93353 210 3 LNLTERQIKIW O43365 228 3 LNLTERQVKIW O42506 253 3 LNLTERQIKIW HXD3_MOUSE 216 3 LNLTERQIKIW HXD3_HUMAN 215 3 LNLTERQIKIW HXA3_MOUSE 229 3 LCLTERQIKIW HMUX_DROME 332 3 LCLTERQIKIW O76759 256 3 LCLTERQIKIW O76758 273 3 LCLTERQIKIW O44269 172 3 LQLNETQVKIW HXA1_HUMAN 261 3 LQLNETQVKIW HXA1_MOUSE 262 3 LQLNETQVKIW O43363 266 3 LDLTERQVKVW HMPB_DROME 235 3 LDLTEAQIKIW Q25679 210 3 LCLSERQIKIW P91714 299 3 LELNETQVKIW HXB1_CHICK 250 3 LLLNETQVKIW Q25131 131 3 LHLTERQVKIW MAB5_CAEEL 307 3 LMLTETQVKIW HB9_HUMAN 279 3 LDLTERQVKVW HXA2_CHICK 177 3 LDLTERQVKVW HXA2_MOUSE 176 3 LDLTERQVKVW HXA2_RAT 176 3 LDLTERQVKVW HXB2_HUMAN 180 3 LDLTERQVKVW O43364 180 3 LDLTERQVKVW O93365 195 3 LELNETQVKIW HXB1_HUMAN 240 3 LELNETQVKIW HXB1_MOUSE 236 3 LGLTERQLKIW O42139 200 3 LNLSERQIKIW O62523 247 3 LMLTERQVKIW LI39_CAEEL 202 3 LNLSERQVKIW HXB9_MOUSE 222 3 LNLSERQVKIW HXB9_XENLA 204 3 LELNETQVKIW HXA1_BRARE 245 3 LNLSERQIKIW HXB3_MOUSE 228 3 LNLSERQIKIW HXB3_HUMAN 225 3 LNLSERQIKIW HXB3_CHICK 196 3 LDLTERQVKIW O44936 231 3 LDLTEKQVKIW Q25182 218 3 LDLTEKQVKIW O17476 224 3 LELNETQVKIW HXB1_CYPCA 258 3 LELNETQVKIW O13073 323 3 LQLNDTQVKIW HXD1_MOUSE 265 3 LQLNDTQVKIW HXD1_XENLA 237 3 LQLNDTQVKIW Q91767 238 3 LDLTERQVKVW MOX2_HUMAN 223 3 LDLTERQVKVW MOX2_MOUSE 223 3 LDLTERQVKVW MOX2_RAT 223 3 LDLTERQVKVW MOX2_XENLA 218 3 LNLTERHIKIW HM8_XENLA 184 3 LNLTERHIKIW IPF1_HUMAN 183 3 LNLTERHIKIW IPF1_MESAU 183 3 LNLTERHIKIW IPF1_MOUSE 184 3 LNLTERHIKIW IPF1_RAT 183 3 LNLTERHIKIW O60594 183 3 LSLCERQVKIW HMZ1_DROSU 125 3 LSLCERQVKIW HMZ1_DROME 127 3 LNLSETQVKTW Q19937 157 3 LNLSEKQVKIW O93290 173 3 LNLSEKQVKIW GSHI_MOUSE 183 3 LNLSEKQVKIW GSH2_MOUSE 240 3 LELSERQVKVW Q25144 200 3 LELTERQVKVW Q26381 123 3 LSLTERHIKIW O73726 174 3 VCLSERQIKIW O76938 157 3 LGLSETQVKTW Q04787 169 3 LRLTETQVKIW HMBP_DROME 212 3 LNLTETQVKIW HMMC_BRARE 188 3 LNLTETQVKIW HMX2_CHICK 171 3 LNLTETQVKIW HMX2_COTJA 171 3 LNLTETQVKIW HMX2_MOUSE 179 3 LNLTETQVKIW O44937 215 3 LKLTETQVKIW P70061 239 3 LKLTETQVKIW O93590 137 3 LKLTETQVKIW O13090 184 3 LKLTETQVKIW HK32_MOUSE 243 3 LDLSERQVKVW MOX1_HUMAN 208 3 LDLSERQVKVW MOX1_MOUSE 207 3 LKLTETQVKIW O13091 170 3 LKLTETQVKIW HK31_MOUSE 162 3 LKLTETQVKIW HK31_HUMAN 161 3 LELSESQIKIW Q25186 198 3 INLTDRQVKIW HXCA_MOUSE 305 3 LSLTETQVKIW HMMA_BRARE 159 3 LSLTETQVKIW HMX1_BOVIN 203 3 LSLTETQVKIW HMX1_CHICK 159 3 LSLTETQVKIW HMX1_HUMAN 203 3 LSLTETQVKIW HMX1_MOUSE 203 3 LSLTETQVKIW HMXX_CHICK 198 3 LSLTETQVKIW MSX3_MOUSE 124 3 LSLTETQVKIW Q90235 141 3 LSLTETQVKIW Q90455 148 3 LRLTETQVKIW HMSH_DROME 458 3 LRLTETQVKIW Q24481 380 3 LQLTETQVKIW YRN1_CAEEL 166 3 LQLTETQVKIW O70218 228 3 VNLTDRQVKIW HXDA_HUMAN 303 3 VNLTDRQVKIW HXDA_MOUSE 303 3 LRLTETQIKIW HMRO_DROME 228 3 LRLTETQIKIW Q24487 50 3 LTLTETQVKIW HMMD_BRARE 137 3 LHLTETQVKIW Q90853 235 3 LHLTETQVKIW O88699 264 3 LHLTETQVKIW O57601 218 3 LHLTETQVKIW HK51_MOUSE 366 3 VSLTDRQVKIW Q90469 295 3 LNLTERQVKTW Q24780 191 3 VHLTDRQVKIW O43605 356 3 VHLTDRQVKIW O43370 378 3 VHLTDRQVKIW HXAA_MOUSE 362 3 VHLTDRQVKIW HXAA_HUMAN 459 3 LSLTETQVKIW HMN1_DROME 582 3 LSLTETQVKIW SAX1_MOUSE 193 3 LKLTSTQVKIW HK23_MOUSE 182 3 LKLTSTQVKIW Q98871 179 3 LKLTSTQVKIW Q91863 188 3 LKLTSTQVKIW Q91862 186 3 LKLTSTQVKIW Q91861 193 3 LKLTSTQVKIW Q91623 193 3 LKLTSTQVKIW O73907 176 3 LKLTSTQVKIW O61286 407 3 LSLSERQIKIW HMFT_DROME 294 3 LQLTSTQVKIW HK26_MOUSE 160 3 STLTDRQVKIW O42505 126 3 LGLTQTQVKIW HMDL_BRAFL 153 3 LGLTQTQVKIW HMDL_DROME 161 3 LHLTETQVKIW Q91964 164 3 LGLTQTQVKIW DLX2_BRARE 160 3 LGLTQTQVKIW DLX5_BRARE 162 3 LGLTQTQVKIW DLX2_MOUSE 192 3 LGLTQTQVKIW DLX2_HUMAN 189 3 LQLNESQIKIW O76848 183 3 LNLSERQIKIW HMFT_DROHY 320 3 LRLSETQIKIW HMRO_DROVI 201 3 LGLTATQVKIW Q21169 162 3 LGLTQTQVKIW DLX3_AMBME 163 3 LGLTQTQVKIW DLX3_BRARE 162 3 LGLTQTQVKIW DLX3_HUMAN 166 3 LGLTQTQVKIW DLX3_MOUSE 166 3 LGLTQTQVKIW DLX3_NOTVI 162 3 LGLTQTQVKIW DLX3_PLEWA 163 3 LGLTQTQVKIW HMD2_XENLA 167 3 LKLTSTQVKIW Q98873 161 3 LKLTSTQVKIW HK25_MOUSE 174 3 LKLTSTQVKIW HK25_HUMAN 175 3 LHLTETQVKIW Q18532 102 3 LQLTERQVKIW HMAB_DROME 424 3 LKLTSTQVKIW HK25_CHICK 156 3 LKLTSTQVKIW Q98872 178 3 LKLTSTQVKIW O13160 178 3 LKLTSTQVKIW HK25_XENLA 161 3 LNLTETQVKIW HMX2_HUMAN 179 3 LQLTSTQVKIW O13005 101 3 LQLTSTQVKIW O13053 101 3 LGLNESQIKIW HM16_CAEEL 140 3 LKLTSTQVKIW O35767 174 3 LGLNEAQIKIW Q26371 265 3 LGLNEAQIKIW HMEN_DROVI 523 3 LGLNEAQIKIW HMEN_DROME 491 3 LGLTERQVKIW HMD1_CHICK 174 3 LGLTERQVKIW Q91622 187 3 LSFTETQVKIW Q91152 192 3 LGLSERQVKIW CDX4_MOUSE 208 3 LGLSERQVKIW Q90262 188 3 LGLSERQVKIW Q90320 188 3 LGLAEAQIKIW HMEN_BOMMO 317 3 LGLAEAQIKIW HMIN_BOMMO 409 3 LGLTQTQVKIW DLX4_BRARE 174 3 LGLTQTQVKIW DLX1_BRARE 165 3 LGLTQTQVKIW DLX6_BRARE 162 3 LGLTQTQVKIW DLX1_MOUSE 165 3 LGLTQTQVKIW DLX5_CHICK 173 3 LGLTQTQVKIW HMD3_XENLA 174 3 LGLTQTQVKIW DLX5_RAT 174 3 LGLTQTQVKIW DLX5_MOUSE 174 3 LKLSEVQVKIW GBX2_CHICK 276 3 LKLSEVQVKIW GBX2_HUMAN 283 3 LKLSEVQVKIW GBX2_MOUSE 284 3 LKLSEVQVKIW GBX2_XENLA 276 3 LKLSEVQVKIW Q24136 356 3 LKLTDRQIKIW H114_BRARE 182 3 LGLNEAQIKIW HMIN_DROME 508 3 LGLTERQVKIW CDX1_HUMAN 191 3 LGLTERQVKIW CDX1_MOUSE 191 3 LGLAEAQIKIW Q25212 76 3 LMVTETQVKIW O61640 430 3 LRLTPTQVKIW O15522 121 3 LRLTPTQVKIW O70584 118 3 LGLNESQIKIW HME3_BRARE 209 3 LGLNEAQIKIW HMEN_ANOGA 535 3 LGLNESQIKIW HME2_BRARE 213 3 LGLNESQIKIW HMED_XENLA 213 3 LGLNESQIKIW HME2_CHICK 236 3 LNLTECHIKIW Q26449 47 3 LGLHENQIKIW HMEN_ARTSF 286 3 LGLSERQVKIW CDX4_HUMAN 210 3 LQLSEIQVKTW Q91926 166 3 LNLTECHIKIW Q26451 59 3 LGVTQTQVKIW HMD4_XENLA 164 3 LKLNESQIKIW P90688 196 3 LSLNESQIKIW HME2_HUMAN 280 3 LSLNESQIKIW HMEC_XENLA 213 3 LSLNESQIKIW HME2_MOUSE 272 3 LGLSERQVKIW CDX2_HUMAN 221 3 LGLSERQVKIW Q17243 157 3 LGLSERQVKIW P79788 215 3 LGLSERQVKIW CDX2_MESAU 222 3 LQLSERQVKTW O13023 174 3 LQLSERQVKTW HMPH_MOUSE 175 3 LQLSERQVKTW HMPH_HUMAN 174 3 LQLSERQVKTW HMPH_CHICK 181 3 LDLRESQVKIW Q26601 460 3 LGLSERQVKIW CDX2_MOUSE 222 3 LRLSEIQVKTW O42173 166 3 LNLTETQIKTW YZQ6_CAEEL 131 3 LNLSATQVKIW HMTI_DROME 338 3 LKLSDMQVKTW Q24787 114 3 LSLSERQVKIW HMCA_DROME 280 3 LSLSERQVKTW Q21578 204 3 LGLTQTQVKIW DLX7_MOUSE 153 3 LNLTPTQVKIW O16132 216 3 INLTPTQVKIW HMH2_DUGTI 170 3 IRLTPTQVKIW Q90481 162 3 INLTPTQVKIW O77158 192 3 IRLTPTQVKIW HNK2_XENLA 106 3 IRLTPTQVKIW HK22_MOUSE 165 3 IRLTPTQVKIW HK22_MESAU 165 3 LGLTQTQVKIW DLX7_BRARE 166 3 LGLTQTQVKIW DLX8_BRARE 160 3 LNLPETTIKVW Q98863 206 3 LNLPETTIKVW HX3_XENLA 205 3 LNLPETTIKVW EVX2_MOUSE 228 3 LNLPETTIKVW EVX1_MOUSE 220 3 LNLPETTIKVW EVX1_HUMAN 220 3 LGLSQTQVKIW HMD1_CAEEL 139 3 IRLTPTQVKIW Q26436 582 3 IRLTPTQVKIW HMN2_DROME 581 3 LNLPETTIKVW Q90265 73 3 LRLSERQVKIW Q91542 188 3 LNLSEKQIKTW Q24781 205 3 LGVTQTQVKIW HMD1_XENLA 162 3 LQLSEVQIKTW Q91914 211 3 LNLPESTIKVW HMEV_DROME 107 3 LNLPESTIKVW P92067 108 3 LNLPESTIKVW O01353 106 3 LQLSEVQIKTW Q91669 220 3 LQLSEVQIKTW Q91893 221 3 LQLSEVQIKTW Q91878 221 3 LQLSEVQIKTW Q91877 220 3 IHLTPTQVKIW O14954 185 3 IHLTPTQVKIW TTF1_RAT 198 3 IHLTPTQVKIW TTF1_MOUSE 198 3 IHLTPTQVKIW TTF1_HUMAN 198 3 IHLTPTQVKIW TTF1_CANFA 198 3 IHLTPTQVKIW O14955 198 3 LSLNESQIKIW HME1_HUMAN 339 3 LSLNESQIKIW HME1_MOUSE 349 3 IRLTPTQVKIW Q93793 120 3 IRLTPTQVKIW O17319 182 3 IRLTPTQVKIW O17318 187 3 IRLTPTQVKIW O77058 313 3 IRLTPTQVKIW HM22_CAEEL 226 3 LSLTDAQVKIW HOX1_HALRO 682 3 LQLPESTIKVW O18325 98 3 LGMTESQVKVW O35762 274 3 LGMTESQVKVW Q60554 273 3 LGMTESQVKVW P78426 273 3 LDLSDCQVKTW Q24255 336 3 LDLSDCQVKTW Q23838 367 3 LSLNESRVKIW HME1_CHICK 281 3 LGLTQLQVKTW O08686 149 3 LGLTQLQVKTW O43518 145 3 LGLNESQIKIW HME1_BRARE 180 3 IGLSPTQVKIW HMH1_DUGTI 414 3 LNLTDAQVKVW HMH2_DROME 324 3 LGLTDAQVKVW HLX1_HUMAN 313 3 LGLTDAQVKVW HLX1_MOUSE 310 3 LGLSQLQVKTW P70159 72 3 LGLSNAQVITW P91626 288 3 TQLTDRQIKIW Q21061 149 3 TQLTDRQIKIW EGL5_CAEEL 144 3 LGLTNTQVITW Q26604 74 3 LGLSNAQVITW P91625 390 3 LNLTDTQVKTW O88181 266 3 LELSDCQVKTW Q24256 414 3 LELSDCQVKTW Q24257 412 3 IELTECQVKTW YL15_CAEEL 78 3 LNLPEGTIKVW VAB7_CAEEL 105 3 LGLTNAQVITW LBX1_MOUSE 161 3 LGLTNAQVITW LBX1_HUMAN 161 3 IGLTESRVQVW O09113 141 3 LDLTEARVQVW O42115 252 3 LDLTEARVQVW O35085 367 3 LDLSDCQVKTW HM1D_DROAN 368 3 LQLDEDRIQIW P79738 117 3 LDLEEDRIQIW ANF1_CHICK 156 3 LELDEDRIQIW P79681 131 3 LALDEDRIQIW ANF1_XENLA 147 3 LALDEDRIQIW ANF2_XENLA 143 3 LKMTDAQVKTW Q24357 222 3 LKMTDAQVKTW O93367 209 3 LKMTDAQVKTW O93366 205 3 LKMTDAQVKTW O55144 203 3 LKMTDAQVKTW O43711 203 3 LKMTDAQVKTW HX11_MOUSE 240 3 LKMTDAQVKTW HX11_HUMAN 238 3 LRMTDAQVKTW O43763 186 3 LRMTDAQVKTW Q61663 194 3 LGLKDSQVKIW DBX_MOUSE 218 3 VGLTESRVQVW O76971 153 3 LGLSEARVQVW O00412 154 3 LGLSEARVQVW O00413 154 3 LGLSEARVQVW O15266 154 3 LGLSEARVQVW O15267 154 3 LGLSEARVQVW O35749 79 3 LGLSEARVQVW O35750 79 3 LGLSEARVQVW O60465 48 3 LGLSEARVQVW O60902 97 3 LGLSEARVQVW O60903 48 3 LGLSEARVQVW O73678 144 3 LGLSEARVQVW P70390 177 3 MGLTDTQVKTW HM30_CAEEL 194 3 LNLSESRVQVW Q24477 341 3 INLTEARVQVW Q62798 70 3 VHLTEARVQVW O62545 77 3 IDLTEARVQVW O14813 127 3 IDLTEARVQVW O35690 135 3 IDLTEARVQVW Q62066 127 3 IDLTEARVQVW Q62782 127 3 IDLTEARVQVW Q99453 135 3 IGLTEARIQVW Q06453 122 3 TNLTEARVRVW O18400 305 3 TNLTEARVRVW O60578 76 3 TNLTEARVRVW O60579 122 3 TNLTEARVRVW O60580 129 3 TNLTEARVRVW O70336 129 3 TNLTEARVRVW O75364 99 3 TNLTEARVRVW O93385 138 3 TNLTEARVRVW O93396 131 3 TNLTEARVRVW PIX2_HUMAN 76 3 TNLTEARVRVW PIX2_MOUSE 76 3 TNLTEARVRVW PIX3_MOUSE 99 3 VQLTEARVQVW Q21836 154 3 TNLTEPRVRVW PIX1_HUMAN 126 3 TNLTEPRVRVW PIX1_MOUSE 127 3 IDLTEARVQVW O01874 186 3 TNLTEARVRGW PIX3_RAT 99 3 ISLTEPRVRVW UN30_CAEEL 149 3 VNLSEARVQVW Q06348 135 3 INLPESRVQVW HMOC_DROME 110 3 INLPESRVQVW O45024 93 3 INLPESRVQVW O46033 100 3 INLPESRVQVW O46169 164 3 INLPESRVQVW O46170 106 3 INLPESRVQVW O61282 168 3 INLPESRVQVW O93488 76 3 INLPESRVQVW O93489 73 3 INLPESRVQVW OTX1_BRARE 75 3 INLPESRVQVW OTX1_HUMAN 75 3 INLPESRVQVW OTX1_MOUSE 75 3 INLPESRVQVW OTX1_RAT 75 3 INLPESRVQVW OTX2_BRARE 75 3 INLPESRVQVW OTX2_HUMAN 75 3 INLPESRVQVW OTX2_MOUSE 75 3 INLPESRVQVW OTX2_XENLA 75 3 INLPESRVQVW OTX3_BRARE 75 3 INLPESRVQVW OTX_STRPU 168 3 HOMEOBOX3 Length of motif = 10 Motif number = 3 Homeobox motif III - 3 PCODE ST INT WFQNRRMKYK HMB1_STRPU 237 -1 WFQNRRMKWK HB7A_XENLA 187 -1 WFQNRRMKWK HB7B_XENLA 185 -1 WFQNRRMKWK HMAN_DROME 344 -1 WFQNRRMKWK HXA7_HUMAN 177 -1 WFQNRRMKWK HXA7_MOUSE 176 -1 WFQNRRMKWK HXA7_XENLA 169 -1 WFQNRRMKWK HXB6_BRARE 197 -1 WFQNRRMKWK HXB6_HUMAN 193 -1 WFQNRRMKWK HXB6_MOUSE 193 -1 WFQNRRMKWK HXB7_HUMAN 184 -1 WFQNRRMKWK HXB7_MOUSE 184 -1 WFQNRRMKWK HXC6_HUMAN 106 -1 WFQNRRMKWK HXC6_MOUSE 188 -1 WFQNRRMKWK HXC6_SHEEP 106 -1 WFQNRRMKWK HXC6_XENLA 188 -1 WFQNRRMKWK O42504 187 -1 WFQNRRMKWK O43368 177 -1 WFQNRRMKWK O76760 327 -1 WFQNRRMKWK O76761 291 -1 WFQNRRMKWK Q17188 225 -1 WFQNRRMKWK Q24508 371 -1 WFQNRRMKWK Q24645 360 -1 WFQNRRMKWK Q25213 261 -1 WFQNRRMKWK Q26469 294 -1 WFQNRRMKWK Q64078 48 -1 WFQNRRMKWK Q64081 48 -1 WFQNRRMKWK SCR_DROME 369 -1 WFQNRRMKWK O43366 262 -1 WFQNRRMKWK HXA4_MOUSE 227 -1 WFQNRRMKWK HXA4_HUMAN 262 -1 WFQNRRMKWK HXA4_CHICK 256 -1 WFQNRRMKWK O18313 189 -1 WFQNRRMKWK O76939 273 -1 WFQNRRMKWK O76937 220 -1 WFQNRRMKWK HXA7_COTJA 176 -1 WFQNRRMKWK O43367 242 -1 WFQNRRMKWK HXD4_MOUSE 199 -1 WFQNRRMKWK HXD4_HUMAN 201 -1 WFQNRRMKWK HXD4_CHICK 191 -1 WFQNRRMKWK HXC4_MOUSE 203 -1 WFQNRRMKWK HXC4_HUMAN 203 -1 WFQNRRMKWK HXB5_MOUSE 241 -1 WFQNRRMKWK HXB5_HUMAN 241 -1 WFQNRRMKWK HXB5_BRARE 247 -1 WFQNRRMKWK HXA5_MOUSE 242 -1 WFQNRRMKWK HXA5_HUMAN 242 -1 WFQNRRMKWK Q64082 48 -1 WFQNRRMKWK HXD8_CHICK 142 -1 WFQNRRMKWK HXC8_MOUSE 196 -1 WFQNRRMKWK HXB8_MOUSE 193 -1 WFQNRRMKVK Q26445 156 -1 WFQNRRMKWK HMDF_DROME 413 -1 WFQNRRMKWK P92161 280 -1 WFQNRRMKWK HXC5_MOUSE 202 -1 WFQNRRMKWK HXC5_HUMAN 202 -1 WFQNRRMKWK HXC5_BRARE 212 -1 WFQNRRMKWK HXB4_CHICK 197 -1 WFQNRRMKWK O13074 210 -1 WFQNRRMKWK HXB4_MOUSE 208 -1 WFQNRRMKWK HXB4_HUMAN 209 -1 WFQNRRMKAK Q26868 230 -1 WFQNRRMKWK HXB4_XENLA 188 -1 WFQNRRMKWK O42503 272 -1 WFQNRRMKLK O76762 185 -1 WFQNRRMKLK HMAA_DROME 445 -1 WFQNRRMKQK HMLA_DROME 554 -1 WFQNRRMKWK HXD8_MOUSE 242 -1 WFQNRRMKHK O46127 88 -1 WFQNRRMKQK Q24782 187 -1 WFQNRRMKLK HMZ2_DROME 90 -1 WFQNRRMKWK HXC6_NOTVI 188 -1 WFQNRRMKWK O57374 213 -1 WFQNRRMKHK O61575 163 -1 WFQNRRMKMK HXA9_HUMAN 252 -1 WFQNRRMKMK HXC9_MOUSE 239 -1 WFQNRRMKMK HXD9_HUMAN 322 -1 WFQNRRMKMK HXD9_MOUSE 319 -1 WFQNRRMKMK O43369 253 -1 WFQNRRMKMK O43429 253 -1 WFQNRRMKMK O70154 252 -1 WFQNRRMKMK O75805 179 -1 WFQNRRMKMK O75806 249 -1 WFQNRRMKMK Q60499 157 -1 WFQNRRMKMK Q64083 48 -1 WFQNRRMKQK O76842 114 -1 WFQNRRMKMK O42502 238 -1 WFQDRRMKWK Q23990 369 -1 WFQNRRMKYK HOX3_BRAFL 182 -1 WFQNRRMKYK Q99955 241 -1 WFQNRRMKYK Q64084 48 -1 WFQNRRMKYK O93353 220 -1 WFQNRRMKYK O43365 238 -1 WFQNRRMKMK O42506 263 -1 WFQNRRMKYK HXD3_MOUSE 226 -1 WFQNRRMKYK HXD3_HUMAN 225 -1 WFQNRRMKYK HXA3_MOUSE 239 -1 WFQNRRMKLK HMUX_DROME 342 -1 WFQNRRMKLK O76759 266 -1 WFQNRRMKLK O76758 283 -1 WFQNRRMKLK O44269 182 -1 WFQNRRMKQK HXA1_HUMAN 271 -1 WFQNRRMKQK HXA1_MOUSE 272 -1 WFQNRRMKQK O43363 276 -1 WFQNRRMKHK HMPB_DROME 245 -1 WFQNRRMKHK Q25679 220 -1 WFQNRRMKLK P91714 309 -1 WFQNRRMKQK HXB1_CHICK 260 -1 WFQNRRMKQK Q25131 141 -1 WFQNRRMKHK MAB5_CAEEL 317 -1 WFQNRRMKWK HB9_HUMAN 289 -1 WFQNRRMKHK HXA2_CHICK 187 -1 WFQNRRMKHK HXA2_MOUSE 186 -1 WFQNRRMKHK HXA2_RAT 186 -1 WFQNRRMKHK HXB2_HUMAN 190 -1 WFQNRRMKHK O43364 190 -1 WFQNRRMKHK O93365 205 -1 WFQNRRMKQK HXB1_HUMAN 250 -1 WFQNRRMKQK HXB1_MOUSE 246 -1 WFQNRRMKWK O42139 210 -1 WFQNRRMKYK O62523 257 -1 WFQNRRMKHK LI39_CAEEL 212 -1 WFQNRRMKMK HXB9_MOUSE 232 -1 WFQNRRMKMK HXB9_XENLA 214 -1 WFQNRRMKQK HXA1_BRARE 255 -1 WFQNRRMKYK HXB3_MOUSE 238 -1 WFQNRRMKYK HXB3_HUMAN 235 -1 WFQNRRMKYK HXB3_CHICK 206 -1 WFQNRRMKMK O44936 241 -1 WFQNRRVKWK Q25182 228 -1 WFQNRRVKWK O17476 234 -1 WFQNRRMKQK HXB1_CYPCA 268 -1 WFQNRRMKQK O13073 333 -1 WFQNRRMKQK HXD1_MOUSE 275 -1 WFQNRRMKQK HXD1_XENLA 247 -1 WFQNRRMKQK Q91767 248 -1 WFQNRRMKWK MOX2_HUMAN 233 -1 WFQNRRMKWK MOX2_MOUSE 233 -1 WFQNRRMKWK MOX2_RAT 233 -1 WFQNRRMKWK MOX2_XENLA 228 -1 WFQNRRMKWK HM8_XENLA 194 -1 WFQNRRMKWK IPF1_HUMAN 193 -1 WFQNRRMKWK IPF1_MESAU 193 -1 WFQNRRMKWK IPF1_MOUSE 194 -1 WFQNRRMKWK IPF1_RAT 193 -1 WFQNRRMKWK O60594 193 -1 WFQNRRMKFK HMZ1_DROSU 135 -1 WFQNRRMKFK HMZ1_DROME 137 -1 WFQNRRMKHK Q19937 167 -1 WFQNRRVKHK O93290 183 -1 WFQNRRVKHK GSHI_MOUSE 193 -1 WFQNRRVKHK GSH2_MOUSE 250 -1 WFQNRRMKWK Q25144 210 -1 WFQNRRMKCK Q26381 133 -1 WFQNRRMKWK O73726 184 -1 WFQNRRMKYK O76938 167 -1 WFQNRRMKHK Q04787 179 -1 WFQNRRYKTK HMBP_DROME 222 -1 WFQNRRAKAK HMMC_BRARE 198 -1 WFQNRRAKAK HMX2_CHICK 181 -1 WFQNRRAKAK HMX2_COTJA 181 -1 WFQNRRAKAK HMX2_MOUSE 189 -1 WFQNRRAKAK O44937 225 -1 WFQNRRYKTK P70061 249 -1 WFQNRRYKTK O93590 147 -1 WFQNRRYKTK O13090 194 -1 WFQNRRYKTK HK32_MOUSE 253 -1 WFQNRRMKWK MOX1_HUMAN 218 -1 WFQNRRMKWK MOX1_MOUSE 217 -1 WFQNRRYKTK O13091 180 -1 WFQNRRYKTK HK31_MOUSE 172 -1 WFQNRRYKTK HK31_HUMAN 171 -1 WFQNRRMKQK Q25186 208 -1 WFQNRRMKLK HXCA_MOUSE 315 -1 WFQNRRAKAK HMMA_BRARE 169 -1 WFQNRRAKAK HMX1_BOVIN 213 -1 WFQNRRAKAK HMX1_CHICK 169 -1 WFQNRRAKAK HMX1_HUMAN 213 -1 WFQNRRAKAK HMX1_MOUSE 213 -1 WFQNRRAKAK HMXX_CHICK 208 -1 WFQNRRAKAK MSX3_MOUSE 134 -1 WFQNRRAKAK Q90235 151 -1 WFQNRRAKAK Q90455 158 -1 WFQNRRAKAK HMSH_DROME 468 -1 WFQNRRAKAK Q24481 390 -1 WFQNRRAKSK YRN1_CAEEL 176 -1 WFQNRRNKWK O70218 238 -1 WFQNRRMKLK HXDA_HUMAN 313 -1 WFQNRRMKLK HXDA_MOUSE 313 -1 WFQNRRAKDK HMRO_DROME 238 -1 WFQNRRAKDK Q24487 60 -1 WFQNRRAKAK HMMD_BRARE 147 -1 WFQNRRNKWK Q90853 245 -1 WFQNRRNKWK O88699 274 -1 WFQNRRNKWK O57601 228 -1 WFQNRRNKWK HK51_MOUSE 376 -1 WFQNRRMKLK Q90469 305 -1 WFQNRRMKTK Q24780 201 -1 WFQNRRMKLK O43605 366 -1 WFQNRRMKLK O43370 388 -1 WFQNRRMKLK HXAA_MOUSE 372 -1 WFQNRRMKLK HXAA_HUMAN 469 -1 WFQNRRTKWK HMN1_DROME 592 -1 WFQNRRTKWK SAX1_MOUSE 203 -1 WFQNRRYKCK HK23_MOUSE 192 -1 WFQNRRYKCK Q98871 189 -1 WFQNRRYKCK Q91863 198 -1 WFQNRRYKCK Q91862 196 -1 WFQNRRYKCK Q91861 203 -1 WFQNRRYKCK Q91623 203 -1 WFQNRRYKCK O73907 186 -1 WFQNRRYKCK O61286 417 -1 WFQNRRMKSK HMFT_DROME 304 -1 WFQNRRYKSK HK26_MOUSE 170 -1 WFQNRRMKLK O42505 136 -1 WFQNRRSKYK HMDL_BRAFL 163 -1 WFQNRRSKYK HMDL_DROME 171 -1 WFQNRRNKLK Q91964 174 -1 WFQNRRSKFK DLX2_BRARE 170 -1 WFQNRRSKFK DLX5_BRARE 172 -1 WFQNRRSKFK DLX2_MOUSE 202 -1 WFQNRRSKFK DLX2_HUMAN 199 -1 WFQNRRAKLK O76848 193 -1 WFQNRRMKSK HMFT_DROHY 330 -1 WFQNRRAKDK HMRO_DROVI 211 -1 WFQNRRYKCK Q21169 172 -1 WFQNRRSKFK DLX3_AMBME 173 -1 WFQNRRSKFK DLX3_BRARE 172 -1 WFQNRRSKFK DLX3_HUMAN 176 -1 WFQNRRSKFK DLX3_MOUSE 176 -1 WFQNRRSKFK DLX3_NOTVI 172 -1 WFQNRRSKFK DLX3_PLEWA 173 -1 WFQNRRSKFK HMD2_XENLA 177 -1 WFQNRRYKCK Q98873 171 -1 WFQNRRYKCK HK25_MOUSE 184 -1 WFQNRRYKCK HK25_HUMAN 185 -1 WFQNRRNKFK Q18532 112 -1 WFQNRRMKNK HMAB_DROME 434 -1 WFQNRRYKCK HK25_CHICK 166 -1 WFQNRRYKCK Q98872 188 -1 WFQNRRYKCK O13160 188 -1 WFQNRRYKCK HK25_XENLA 171 -1 WFQNRSAKAK HMX2_HUMAN 189 -1 WFQNRRYKCK O13005 111 -1 WFQNRRYKCK O13053 111 -1 WFQNKRAKLK HM16_CAEEL 150 -1 WFQNRRYKCK O35767 184 -1 WFQNKRAKIK Q26371 275 -1 WFQNKRAKIK HMEN_DROVI 533 -1 WFQNKRAKIK HMEN_DROME 501 -1 WFQNRRAKER HMD1_CHICK 184 -1 WFQNRRAKER Q91622 197 -1 WFQNRRAKAK Q91152 202 -1 WFQNRRAKER CDX4_MOUSE 218 -1 WFQNRRAKER Q90262 198 -1 WFQNRRAKER Q90320 198 -1 WFQNKRAKIK HMEN_BOMMO 327 -1 WFQNKRAKIK HMIN_BOMMO 419 -1 WFQNKRSKLK DLX4_BRARE 184 -1 WFQNKRSKFK DLX1_BRARE 175 -1 WFQNKRSKFK DLX6_BRARE 172 -1 WFQNKRSKFK DLX1_MOUSE 175 -1 WFQNKRSKIK DLX5_CHICK 183 -1 WFQNKRSKIK HMD3_XENLA 184 -1 WFQNKRSKIK DLX5_RAT 184 -1 WFQNKRSKIK DLX5_MOUSE 184 -1 WFQNRRAKWK GBX2_CHICK 286 -1 WFQNRRAKWK GBX2_HUMAN 293 -1 WFQNRRAKWK GBX2_MOUSE 294 -1 WFQNRRAKWK GBX2_XENLA 286 -1 WFQNRRAKWK Q24136 366 -1 WFQNRRMKYK H114_BRARE 192 -1 WFQNKRAKLK HMIN_DROME 518 -1 WFQNRRAKER CDX1_HUMAN 201 -1 WFQNRRAKER CDX1_MOUSE 201 -1 WFQNKRAKIK Q25212 86 -1 WFQNRRTKWK O61640 440 -1 WFQNHRYKLK O15522 131 -1 WFQNHRYKLK O70584 128 -1 WFQNKRAKIK HME3_BRARE 219 -1 WFQNKRAKIK HMEN_ANOGA 545 -1 WFQNKRAKIK HME2_BRARE 223 -1 WFQNKRAKIK HMED_XENLA 223 -1 WFQNKRAKIK HME2_CHICK 246 -1 WFQNRRMKWE Q26449 57 -1 WFQNNRAKLK HMEN_ARTSF 296 -1 WFQNRRAKER CDX4_HUMAN 220 -1 WFQNRRMKLK Q91926 176 -1 WFQNRRMKWE Q26451 69 -1 WFQNRRSKFK HMD4_XENLA 174 -1 WFQNKRAKIK P90688 206 -1 WFQNKRAKIK HME2_HUMAN 290 -1 WFQNKRAKIK HMEC_XENLA 223 -1 WFQNKRAKIK HME2_MOUSE 282 -1 WFQNRRAKER CDX2_HUMAN 231 -1 WFQNRRAKER Q17243 167 -1 WFQNRRAKER P79788 225 -1 WFQNRRAKER CDX2_MESAU 232 -1 WFQNRRAKWR O13023 184 -1 WFQNRRAKWR HMPH_MOUSE 185 -1 WFQNRRAKWR HMPH_HUMAN 184 -1 WFQNRRAKWR HMPH_CHICK 191 -1 WFQNKRAKTK Q26601 470 -1 WFQNRRAKER CDX2_MOUSE 232 -1 WFQNRRMKLK O42173 176 -1 WFQNRRTKWK YZQ6_CAEEL 141 -1 WFQNRRYKSK HMTI_DROME 348 -1 WFQNRRMKYK Q24787 124 -1 WFQNRRAKER HMCA_DROME 290 -1 WFQNRRAKWR Q21578 214 -1 WFQNKRSKYK DLX7_MOUSE 163 -1 WFQNKRYKCK O16132 226 -1 WFQNHRYKCK HMH2_DUGTI 180 -1 WFQNHRYKMK Q90481 172 -1 WFQNHRYKCK O77158 202 -1 WFQNHRYKMK HNK2_XENLA 116 -1 WFQNHRYKMK HK22_MOUSE 175 -1 WFQNHRYKMK HK22_MESAU 175 -1 WFQNKRSKYK DLX7_BRARE 176 -1 WFQNKRSKYK DLX8_BRARE 170 -1 WFQNRRMKDK Q98863 216 -1 WFQNRRMKDK HX3_XENLA 215 -1 WFQNRRMKDK EVX2_MOUSE 238 -1 WFQNRRMKDK EVX1_MOUSE 230 -1 WFQNRRMKDK EVX1_HUMAN 230 -1 WFQNRRSKQK HMD1_CAEEL 149 -1 WFQNHRYKTK Q26436 592 -1 WFQNHRYKTK HMN2_DROME 591 -1 WFQNRRMKDK Q90265 83 -1 WFQNRRAKEG Q91542 198 -1 WFQNRRVKER Q24781 215 -1 WFQNKRSKYK HMD1_XENLA 172 -1 WFQNRRMKYK Q91914 221 -1 WFQNRRMKDK HMEV_DROME 117 -1 WFQNRRMKDK P92067 118 -1 WFQNRRMKDK O01353 116 -1 WFQNRRMKYK Q91669 230 -1 WFQNRRMKYK Q91893 231 -1 WFQNRRMKYK Q91878 231 -1 WFQNRRMKYK Q91877 230 -1 WFQNHRYKMK O14954 195 -1 WFQNHRYKMK TTF1_RAT 208 -1 WFQNHRYKMK TTF1_MOUSE 208 -1 WFQNHRYKMK TTF1_HUMAN 208 -1 WFQNHRYKMK TTF1_CANFA 208 -1 WFQNHRYKMK O14955 208 -1 WFQNKRAKIK HME1_HUMAN 349 -1 WFQNKRAKIK HME1_MOUSE 359 -1 WFQNHRYKCK Q93793 130 -1 WFQNHRYKCK O17319 192 -1 WFQNHRYKCK O17318 197 -1 WFQNHRYKNK O77058 323 -1 WFQNHRYKTK HM22_CAEEL 236 -1 WFQNRRMKWR HOX1_HALRO 692 -1 WFQNRRMKDK O18325 108 -1 WFQNRRTKWR O35762 284 -1 WFQNRRTKWR Q60554 283 -1 WFQNRRTKWR P78426 283 -1 WYQNRRTKWK Q24255 346 -1 WYQNRRTKWK Q23838 377 -1 WFQNKRAKIK HME1_CHICK 291 -1 WYQNRRMKWK O08686 159 -1 WYQNRRMKWK O43518 155 -1 WFQNKRAKIK HME1_BRARE 190 -1 WFQNHRYKMK HMH1_DUGTI 424 -1 WFQNRRMKWR HMH2_DROME 334 -1 WFQNRRMKWR HLX1_HUMAN 323 -1 WFQNRRMKWR HLX1_MOUSE 320 -1 WYQNRRMKWK P70159 82 -1 WFQNRRAKLK P91626 298 -1 WFQNRRMKAK Q21061 159 -1 WFQNRRMKAK EGL5_CAEEL 154 -1 WFQNRRAKLK Q26604 84 -1 WFQNRRAKQK P91625 400 -1 WYQNRRTKWK O88181 276 -1 WYQNRRTKWK Q24256 424 -1 WYQNRRTKWK Q24257 422 -1 WFQNRRTKKR YL15_CAEEL 88 -1 WFQNRRMKDK VAB7_CAEEL 115 -1 WFQNRRAKLK LBX1_MOUSE 171 -1 WFQNRRAKLK LBX1_HUMAN 171 -1 WFQNRRAKWK O09113 151 -1 WFQNRRAKWR O42115 262 -1 WFQNRRAKWR O35085 377 -1 WYQNRRTKWM HM1D_DROAN 378 -1 WFQNRRAKLK P79738 127 -1 WFQNRRAKLK ANF1_CHICK 166 -1 WFQNRRAKLK P79681 141 -1 WFQNRRAKLK ANF1_XENLA 157 -1 WFQNRRAKLK ANF2_XENLA 153 -1 WFQNRRTKWR Q24357 232 -1 WFQNRRTKWR O93367 219 -1 WFQNRRTKWR O93366 215 -1 WFQNRRTKWR O55144 213 -1 WFQNRRTKWR O43711 213 -1 WFQNRRTKWR HX11_MOUSE 250 -1 WFQNRRTKWR HX11_HUMAN 248 -1 WFQNRRTKWR O43763 196 -1 WFQNRRTKWR Q61663 204 -1 WFQNRRMKWR DBX_MOUSE 228 -1 WFQNRRAKWK O76971 163 -1 WFQNRRAKCR O00412 164 -1 WFQNRRAKCR O00413 164 -1 WFQNRRAKCR O15266 164 -1 WFQNRRAKCR O15267 164 -1 WFQNRRAKCR O35749 89 -1 WFQNRRAKCR O35750 89 -1 WFQNRRAKCR O60465 58 -1 WFQNRRAKCR O60902 107 -1 WFQNRRAKCR O60903 58 -1 WFQNRRAKCR O73678 154 -1 WFQNRRAKCR P70390 187 -1 WYQNRRTKWK HM30_CAEEL 204 -1 WFQNRRAKWR Q24477 351 -1 WFQNRRAKWR Q62798 80 -1 WFQNRRAKWR O62545 87 -1 WFQNRRAKFR O14813 137 -1 WFQNRRAKFR O35690 145 -1 WFQNRRAKFR Q62066 137 -1 WFQNRRAKFR Q62782 137 -1 WFQNRRAKFR Q99453 145 -1 WFQNRRAKWR Q06453 132 -1 WFKNRRAKWR O18400 315 -1 WFKNRRAKWR O60578 86 -1 WFKNRRAKWR O60579 132 -1 WFKNRRAKWR O60580 139 -1 WFKNRRAKWR O70336 139 -1 WFKNRRAKWR O75364 109 -1 WFKNRRAKWR O93385 148 -1 WFKNRRAKWR O93396 141 -1 WFKNRRAKWR PIX2_HUMAN 86 -1 WFKNRRAKWR PIX2_MOUSE 86 -1 WFKNRRAKWR PIX3_MOUSE 109 -1 WFQNRRAKYR Q21836 164 -1 WFKNRRAKWR PIX1_HUMAN 136 -1 WFKNRRAKWR PIX1_MOUSE 137 -1 WFQNRRAKYR O01874 196 -1 WFKNRRAKWR PIX3_RAT 109 -1 WFKNRRAKWR UN30_CAEEL 159 -1 WFQNRRAKFR Q06348 145 -1 WFKNRRAKCR HMOC_DROME 120 -1 WFKNRRAKCR O45024 103 -1 WFKNRRAKCR O46033 110 -1 WFKNRRAKCR O46169 174 -1 WFKNRRAKCR O46170 116 -1 WFKNRRAKCR O61282 178 -1 WFKNRRAKCR O93488 86 -1 WFKNRRAKCR O93489 83 -1 WFKNRRAKCR OTX1_BRARE 85 -1 WFKNRRAKCR OTX1_HUMAN 85 -1 WFKNRRAKCR OTX1_MOUSE 85 -1 WFKNRRAKCR OTX1_RAT 85 -1 WFKNRRAKCR OTX2_BRARE 85 -1 WFKNRRAKCR OTX2_HUMAN 85 -1 WFKNRRAKCR OTX2_MOUSE 85 -1 WFKNRRAKCR OTX2_XENLA 85 -1 WFKNRRAKCR OTX3_BRARE 85 -1 WFKNRRAKCR OTX_STRPU 178 -1

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