WORKLIST ENTRIES (1):

TRNASYNTHTRP View alignment View Structure    Tryptophanyl-tRNA synthetase signature
 Type of fingerprint: COMPOUND with 4  elements
Links:
   PRINTS; PR00983 TRNASYNTHCYS; PR00984 TRNASYNTHILE; PR00985 TRNASYNTHLEU
   PRINTS; PR00986 TRNASYNTHVAL; PR00987 TRNASYNTHGLU; PR01038 TRNASYNTHARG
   PRINTS; PR01040 TRNASYNTHTYR; PR01041 TRNASYNTHMET
   INTERPRO; IPR002306
   PROSITE; PS00178 AA_TRNA_LIGASE_I
   PFAM; PF00579 tRNA-synt_1b

 Creation date 18-DEC-1998; UPDATE 16-JUN-1999

   1. LODISH, H., BALTIMORE, D., BERK, A., ZIPURSKY, S.L., MATSUDAIRA, P.
   AND DARNELL, J.
   Nucleic Acids, the Genetic Code, and Protein Synthesis. 
   IN MOLECULAR CELL BIOLOGY, SCIENTIFIC AMERICAN BOOKS, NEW YORK, 1995,
   PP.126-128

   2. DELARUE, M.
   Aminoacyl-tRNA synthetases.
   CURR.OPIN.STRUCT.BIOL. 5 48-55 (1995).

   3. PERONA, J.J., ROULD, M. AND STEITZ, T.A.
   Structural Basis for Transfer RNA Aminoacylation by Escherichia coli
   Glutaminyl-tRNA Synthetase.
   BIOCHEMISTRY 32 8758-8771 (1993).

   Appropriate attachment of an amino acid to its cognate tRNA is the key to
   faithful translation of the genetic code. The family of enzymes responsible
   for this is the aminoacyl-tRNA synthetases (AATRSs) (EC 6.1.1.-).
   
   AATRSs catalyse a two-step reaction:
   
   (1) Enzyme + amino acid + ATP ---> Enzyme(aminoacyl-AMP) + PPi
   
   (2) tRNA + Enzyme(aminoacyl-AMP) ---> aminoacyl-tRNA + AMP + Enzyme
   
   In the first step, they form an aminoacyl-adenylate, in which the carboxyl
   of the amino acid is linked to the alpha-phosphate of ATP, by displacing
   the pyrophosphate. When the correct tRNA is bound, the aminoacyl group is
   transferred to the 2'- or 3'-terminal OH of the tRNA at the expense of AMP
   [1].
   
   Based on structural and sequence comparisons, this group of at least 20
   proteins (in prokaryotes there are approximately 20, but in eukaryotes
   there are usually 2 forms for each amino acid; namely, the cytosolic and
   mitochondrial forms) can be divided into two classes.
   
   Class I AATRSs contain a characteristic Rossman fold and are mostly
   monomeric. At the primary structure level, two highly-conserved motifs
   are observed, 'HIGH' and 'KMSKS' [2,3]; these are associated with the ATP-
   binding site.
   
   Class II AATRSs share an anti-parallel beta-sheet formation, flanked by
   alpha-helices [3], and are mostly dimeric or multimeric.
   
   Further distinction between the two classes is evident when the reaction
   mechanisms are investigated. In reactions catalysed by the class I AATRSs,
   the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in
   class II reactions, the 3'-hydroxyl site is preferred.
   
   Tryptophanyl-tRNA synthetase (EC 6.1.1.2 ) is specific to tryptophan and 
   belongs to class I.
  
   TRNASYNTHTRP is a 4-element fingerprint that provides a signature for the
   tryptophanyl-tRNA synthetase. The fingerprint was derived from an initial
   alignment of 23 sequences: the motifs were drawn from conserved regions 
   within the N-terminal portion of the alignment - motifs 1 and 4 contain the
   characteristic HIGH and KMSKS regions respectively. Two iterations on
   OWL31.1 were required to reach convergence, at which point a true set
   comprising 33 sequences was identified. Several partial matches were also
   found, all of which are tyrosyl-tRNA synthetases.
  
   An update on SPTR37_9f identified a true set of 29 sequences, and 4
   partial matches all of which are tyrosyl-tRNA synthetases.

  SUMMARY INFORMATION
     29 codes involving  4 elements
      0 codes involving  3 elements
      4 codes involving  2 elements

   COMPOSITE FINGERPRINT INDEX
  
    4|  29   29   29   29  
    3|   0    0    0    0  
    2|   3    0    1    4  
   --+---------------------
     |   1    2    3    4  

True positives..
 SYW_BACSU      SYW_ECOLI      SYW_HAEIN      SYW_SYNY3      
 O82313         O53386         SYW_BACST      SYW_MYCLE      
 O67115         SYW_MYCPN      SYW_HELPY      O42875         
 SYWM_YEAST     SYW_TREPA      SYW_CLOLO      O84589         
 SYW_HUMAN      SYW_RABIT      SYW_MOUSE      SYW_MYCGE      
 SYW_BORBU      SYW_SCHPO      SYW_BOVIN      SYWM_CAEEL     
 SYW_METJA      O59584         SYWC_YEAST     SYW_METTH      
 SYW_ARCFU      
Subfamily:  Codes involving 2 elements
 Subfamily True positives..
 SYY_SULSO      SYY_METTH      SYY_SYNY3      SYY_ARCFU      


  PROTEIN TITLES
   SYW_BACSU        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   SYW_ECOLI        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   SYW_HAEIN        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   SYW_SYNY3        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   O82313           PUTATIVE TRYTOPHANYL-TRNA SYNTHETASE - ARABIDOPSIS THALIANA 
   O53386           TRYPTOPHANYL TRNA SYNTHETASE - MYCOBACTERIUM TUBERCULOSIS.
   SYW_BACST        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   SYW_MYCLE        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   O67115           TRYPTOPHANYL-TRNA SYNTHETASE - AQUIFEX AEOLICUS.
   SYW_MYCPN        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   SYW_HELPY        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   O42875           PROBABLE TRYPTOPHANYL-TRNA SYNTHETASE, MITOCHONDRIAL (EC 6.1
   SYWM_YEAST       TRYPTOPHANYL-TRNA SYNTHETASE, MITOCHONDRIAL (EC 6.1.1.2) (TR
   SYW_TREPA        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   SYW_CLOLO        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   O84589           TRYPTOPHANYL TRNA SYNTHETASE - CHLAMYDIA TRACHOMATIS.
   SYW_HUMAN        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   SYW_RABIT        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   SYW_MOUSE        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   SYW_MYCGE        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   SYW_BORBU        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   SYW_SCHPO        PUTATIVE TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPH
   SYW_BOVIN        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   SYWM_CAEEL       PROBABLE TRYPTOPHANYL-TRNA SYNTHETASE, MITOCHONDRIAL (EC 6.1
   SYW_METJA        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   O59584           301AA LONG HYPOTHETICAL TRYPTOPHANYL-TRNA SYNTHETASE - PYROC
   SYWC_YEAST       TRYPTOPHANYL-TRNA SYNTHETASE, CYTOPLASMIC (EC 6.1.1.2) (TRYP
   SYW_METTH        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
   SYW_ARCFU        TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) (TRYPTOPHAN--TRNA 
 
   SYY_SULSO        TYROSYL-TRNA SYNTHETASE (EC 6.1.1.1) (TYROSINE--TRNA LIGASE)
   SYY_METTH        TYROSYL-TRNA SYNTHETASE (EC 6.1.1.1) (TYROSINE--TRNA LIGASE)
   SYY_SYNY3        TYROSYL-TRNA SYNTHETASE (EC 6.1.1.1) (TYROSINE--TRNA LIGASE)
   SYY_ARCFU        TYROSYL-TRNA SYNTHETASE (EC 6.1.1.1) (TYROSINE--TRNA LIGASE)

SCAN HISTORY OWL31_1 2 100 NSINGLE SPTR37_9f 3 100 NSINGLE INITIAL MOTIF SETS TRNASYNTHTRP1 Length of motif = 17 Motif number = 1 Tryptophanyl-tRNA synthetase motif I - 1 PCODE ST INT LHIGHYVGSLKNRVQLQ SYW_CLOLO 16 16 PHLGNFFGSIEPWTELQ SYWM_CAEEL 33 33 LHLGHYVGSVVNRLKFQ E70100 18 18 LHLGNYLGAIRSWVEQQ SYW_SYNY3 56 56 LHLGNALGAITQWVALQ SYW_MYCLE 21 21 LTIGNYMGALRQWVNMQ SYW_ECOLI 16 16 LTIGNYMGALRQWVKMQ ECDAMOPRA6 16 16 ITIGNYIGALRQFVELQ SYW_BACST 14 14 VTLGNYIGAMKQFVELQ SYW_BACSU 15 15 FHLGNYLGATRVWTDLC SYWM_YEAST 47 47 QHLGNFLGVMQGLKQLQ SYW_MYCGE 15 15 IHLGNYLGAIKHWVEMQ SYW_HELPY 29 29 MHFGHKMVVDLLKFYQK SYW_METJA 79 79 MHIGHKMIVDQLRWYDR SYW_METTH 74 74 PHFGHKMTMDEIVWHQS SYW_ARCFU 76 76 MHLGHMIPFVFTKWLQE SYWC_YEAST 116 116 MHLGHMIPFMFCKWLQD SYW_SCHPO 96 96 MHVGHLIPFIFTKWLQD SYW_BOVIN 174 174 MHVGHLIPFIFTKWLQD SYW_HUMAN 169 169 MHVGHLIPFIFTKWLQD SYW_RABIT 173 173 CNVGHLIPFIFTKWLQD RABERFX 173 173 MHVGHLIPFIFTKWLQD AB012222 3 3 MHIGHIIPFFATKWLQE G71206 1 1 TRNASYNTHTRP2 Length of motif = 20 Motif number = 2 Tryptophanyl-tRNA synthetase motif II - 1 PCODE ST INT DYLAVGIDPLKSTILVQSQI SYW_CLOLO 69 36 SLIACGVDPNRTLLFRQSDV SYWM_CAEEL 88 38 DYLACGINPDKVSIYLQSAI E70100 71 36 LYLACGIDLQYSTIFVQSHV SYW_SYNY3 106 33 QYLALGIDPGRAVVFVQSHV SYW_MYCLE 75 37 LYLACGIDPEKSTIFVQSHV SYW_ECOLI 66 33 LYLACGIDPEKSTIFVQSHV ECDAMOPRA6 66 33 KYLAVGIDPTQATLFIQSEV SYW_BACST 64 33 LYLAVGLDPEKATLFIQSEV SYW_BACSU 65 33 SILAVGVDPEKASVIYQSAI SYWM_YEAST 102 38 TLLALGLDYGKVNLFLQSDL SYW_MYCGE 65 33 LLLACGIDPKQSGLFIQSEV SYW_HELPY 79 33 NYIALGLDPEKINVYLQSKY SYW_METJA 131 35 GYIALGLDLEKDNIHVYLQS SYW_METTH 126 35 SIIALGLREDAVIYFQSKSS SYW_ARCFU 127 34 DIIAVGFDPKNTFIFSDLQY SYWC_YEAST 169 36 DIIAVGFDPKKTFIFMNSTY SYW_SCHPO 149 36 KDITCGFDINKTFIFSDLDY SYW_BOVIN 225 34 DIIACGFDINKTFIFSDLDY SYW_HUMAN 221 35 DIIACGFDVNKTFIFSDLDY SYW_RABIT 225 35 DIMPCGFDVNKTFIFSDLDY RABERFX 225 35 DIIACGFDINKTFIFSDLEY AB012222 55 35 DIIAVGFDPDKTFIFQNSEF G71206 54 36 TRNASYNTHTRP3 Length of motif = 22 Motif number = 3 Tryptophanyl-tRNA synthetase motif III - 1 PCODE ST INT TTVPVGEDQLPMIEQAREIVRS SYW_CLOLO 147 58 TTVPVGEDQSQHLNLLGGLAYA SYWM_CAEEL 165 57 NLVPVGRDNESHIEFARELARR E70100 148 57 DKVPVGEDQKQHLELTRDIVIR SYW_SYNY3 182 56 DLVPVGEDQRQHLELARDLAQR SYW_MYCLE 152 57 NLVPVGEDQKQHLELSRDIAQR SYW_ECOLI 142 56 NLVPVGEDQKQHLELSRDIAQR ECDAMOPRA6 142 56 DIVPVGEDQKQHIELTRDLAER SYW_BACST 139 55 DLVPVGEDQKQHLELTRNLAER SYW_BACSU 140 55 THVPVGDDQSQHLELTRHLAEK SYWM_YEAST 191 69 DIVPVGNDQKQHLELTNDLAKR SYW_MYCGE 147 62 DLVPVGEDQKQHLELTRNIAEK SYW_HELPY 155 56 VVVPVGIDQDPHIRLTRDIANR SYW_METJA 210 59 VIVPVGPDQDPHIRLTRDIAAR SYW_METTH 205 59 VVVPVGADQDPHMRLTRDLAAR SYW_ARCFU 203 56 CLIPCAIDQDPYFRVCRDVADK SYWC_YEAST 251 62 CLIPCAIDQDPYFRLTRDVSGR SYW_SCHPO 231 62 CLIPCAIDQDPYFRMTRDVAPR SYW_BOVIN 309 64 CLIPCAIDQDPYFRMTRDVAPR SYW_HUMAN 305 64 CLIPCAIDQDPYFRMTRDVAPR SYW_RABIT 309 64 CLIPCAIDQDPYFRMTRDVAPR RABERFX 309 64 CLIPCAIDQDPYFRMTRDVAPR AB012222 139 64 CLIPAAIDQDPYWRLQRDFAES G71206 124 50 TRNASYNTHTRP4 Length of motif = 11 Motif number = 4 Tryptophanyl-tRNA synthetase motif IV - 1 PCODE ST INT KMSKSIGNAIY SYW_CLOLO 201 32 KMSKSSGGPRS SYWM_CAEEL 219 32 KMSKSLDNAIF E70100 200 30 KMSKSDESELS SYW_SYNY3 239 35 KMSKSASSDAG SYW_MYCLE 205 31 KMSKSDDNRNN SYW_ECOLI 195 31 KMSKSDDNRNN ECDAMOPRA6 195 31 KMSKSDPNPKA SYW_BACST 192 31 KMSKSDPNQKA SYW_BACSU 193 31 KMSKSDPNHDS SYWM_YEAST 244 31 KMSKSNPDQNG SYW_MYCGE 200 31 KMSKSHQGANH SYW_HELPY 208 31 KMSSSKPETAI SYW_METJA 255 23 KMSSNRPKSAI SYW_METTH 251 24 KMSSSKPESYI SYW_ARCFU 308 83 KMSASDDTTAI SYWC_YEAST 295 22 KMSASKDSSAI SYW_SCHPO 275 22 KMSASDPNSSI SYW_BOVIN 353 22 KMSASDPNSSI SYW_HUMAN 349 22 KMSASDPNSSI SYW_RABIT 353 22 KMSASDPNSSI RABERFX 353 22 KMSASDPNSSI AB012222 183 22 KMSASKPETAI G71206 168 22 FINAL MOTIF SETS TRNASYNTHTRP1 Length of motif = 17 Motif number = 1 Tryptophanyl-tRNA synthetase motif I - 3 PCODE ST INT VTLGNYIGAMKQFVELQ SYW_BACSU 15 15 LTIGNYMGALRQWVNMQ SYW_ECOLI 16 16 LTIGNYLGALRNWVKMQ SYW_HAEIN 16 16 LHLGNYLGAIRSWVEQQ SYW_SYNY3 56 56 VHLGNYLGAIKNWVALQ O82313 15 15 LHLGNALGAVAQWVGLQ O53386 21 21 ITIGNYIGALRQFVELQ SYW_BACST 14 14 LHLGNALGAITQWVALQ SYW_MYCLE 21 21 LHLGHYFGVIRNWVKLQ O67115 13 13 QHLGNYLGVMQSLIELQ SYW_MYCPN 15 15 IHLGNYLGAIKHWVEMQ SYW_HELPY 29 29 PHIGNYLGSLKQWVQLQ O42875 26 26 FHLGNYLGATRVWTDLC SYWM_YEAST 47 47 LHLGHYAGSLGTRLRIQ SYW_TREPA 14 14 LHIGHYVGSLKNRVQLQ SYW_CLOLO 16 16 LHLGHWIGSIMNRLQLQ O84589 16 16 MHVGHLIPFIFTKWLQD SYW_HUMAN 169 169 MHVGHLIPFIFTKWLQD SYW_RABIT 173 173 MHLGHLVPFIFTKWLED SYW_MOUSE 173 173 QHLGNFLGVMQGLKQLQ SYW_MYCGE 15 15 LHLGHYVGSVVNRLKFQ SYW_BORBU 18 18 MHLGHMIPFMFCKWLQD SYW_SCHPO 96 96 MHVGHLIPFIFTKWLQD SYW_BOVIN 174 174 PHLGNFFGSIEPWTELQ SYWM_CAEEL 33 33 MHFGHKMVVDLLKFYQK SYW_METJA 79 79 MHIGHIIPFFATKWLQE O59584 1 1 MHLGHMIPFVFTKWLQE SYWC_YEAST 116 116 MHIGHKMIVDQLRWYDR SYW_METTH 74 74 PHFGHKMTMDEIVWHQS SYW_ARCFU 76 76 TRNASYNTHTRP2 Length of motif = 20 Motif number = 2 Tryptophanyl-tRNA synthetase motif II - 3 PCODE ST INT LYLAVGLDPEKATLFIQSEV SYW_BACSU 65 33 LYLACGIDPEKSTIFVQSHV SYW_ECOLI 66 33 LYLACGIDPNKSTIFVQSHV SYW_HAEIN 66 33 LYLACGIDLQYSTIFVQSHV SYW_SYNY3 106 33 LYLACGIDVSKASVFVQSHV O82313 65 33 QYLALGIDPGRATIFVQSQV O53386 71 33 KYLAVGIDPTQATLFIQSEV SYW_BACST 64 33 QYLALGIDPGRAVVFVQSHV SYW_MYCLE 75 37 DWLALGLDPQKSVLFIQSLV O67115 64 34 TLLAVGLDPQKACLFLQSDL SYW_MYCPN 65 33 LLLACGIDPKQSGLFIQSEV SYW_HELPY 79 33 ALLAIGINPQKSTLFFQSDV O42875 82 39 SILAVGVDPEKASVIYQSAI SYWM_YEAST 102 38 DYLACGIDAQRAVIYLQSAV SYW_TREPA 67 36 DYLAVGIDPLKSTILVQSQI SYW_CLOLO 69 36 DWLSVGIDPEKSAIYLQSAI O84589 71 38 DIIACGFDINKTFIFSDLDY SYW_HUMAN 221 35 DIIACGFDVNKTFIFSDLDY SYW_RABIT 225 35 DIIACGFDINKTFIFSDLEY SYW_MOUSE 225 35 TLLALGLDYGKVNLFLQSDL SYW_MYCGE 65 33 DYLACGINPDKVSIYLQSAI SYW_BORBU 71 36 DIIAVGFDPKKTFIFMNSTY SYW_SCHPO 149 36 KDITCGFDINKTFIFSDLDY SYW_BOVIN 225 34 SLIACGVDPNRTLLFRQSDV SYWM_CAEEL 88 38 NYIALGLDPEKINVYLQSKY SYW_METJA 131 35 DIIAVGFDPDKTFIFQNSEF O59584 54 36 DIIAVGFDPKNTFIFSDLQY SYWC_YEAST 169 36 GYIALGLDLEKDNIHVYLQS SYW_METTH 126 35 SIIALGLREDAVIYFQSKSS SYW_ARCFU 127 34 TRNASYNTHTRP3 Length of motif = 22 Motif number = 3 Tryptophanyl-tRNA synthetase motif III - 3 PCODE ST INT DLVPVGEDQKQHLELTRNLAER SYW_BACSU 140 55 NLVPVGEDQKQHLELSRDIAQR SYW_ECOLI 142 56 KSVPVGDDQKQHLEITRDIANR SYW_HAEIN 142 56 DKVPVGEDQKQHLELTRDIVIR SYW_SYNY3 182 56 DFVPVGEDQKQHIELAREIAQR O82313 142 57 ELVPVGEDQRQHLELARDVAQR O53386 148 57 DIVPVGEDQKQHIELTRDLAER SYW_BACST 139 55 DLVPVGEDQRQHLELARDLAQR SYW_MYCLE 152 57 EGVPVGEDQLPHIELSREIARR O67115 211 127 DIVPVGNDQKQHLELTRDLAQR SYW_MYCPN 147 62 DLVPVGEDQKQHLELTRNIAEK SYW_HELPY 155 56 THIPVGKDQSQHVELTRSIARS O42875 172 70 THVPVGDDQSQHLELTRHLAEK SYWM_YEAST 191 69 HLVPVGKDNESHVELTREVAKR SYW_TREPA 144 57 TTVPVGEDQLPMIEQAREIVRS SYW_CLOLO 147 58 HLVPVGKDNEAHVELTRDIAKT O84589 150 59 CLIPCAIDQDPYFRMTRDVAPR SYW_HUMAN 305 64 CLIPCAIDQDPYFRMTRDVAPR SYW_RABIT 309 64 CLIPCAIDQDPYFRMTRDVAPR SYW_MOUSE 309 64 DIVPVGNDQKQHLELTNDLAKR SYW_MYCGE 147 62 NLVPVGRDNESHIEFARELARR SYW_BORBU 148 57 CLIPCAIDQDPYFRLTRDVSGR SYW_SCHPO 231 62 CLIPCAIDQDPYFRMTRDVAPR SYW_BOVIN 309 64 TTVPVGEDQSQHLNLLGGLAYA SYWM_CAEEL 165 57 VVVPVGIDQDPHIRLTRDIANR SYW_METJA 210 59 CLIPAAIDQDPYWRLQRDFAES O59584 124 50 CLIPCAIDQDPYFRVCRDVADK SYWC_YEAST 251 62 VIVPVGPDQDPHIRLTRDIAAR SYW_METTH 205 59 VVVPVGADQDPHMRLTRDLAAR SYW_ARCFU 203 56 TRNASYNTHTRP4 Length of motif = 11 Motif number = 4 Tryptophanyl-tRNA synthetase motif IV - 3 PCODE ST INT KMSKSDPNQKA SYW_BACSU 193 31 KMSKSDDNRNN SYW_ECOLI 195 31 KMSKSDDNRNN SYW_HAEIN 195 31 KMSKSDESELS SYW_SYNY3 239 35 KMSKSAPSDQS O82313 208 44 KMSKSAGTDAG O53386 201 31 KMSKSDPNPKA SYW_BACST 192 31 KMSKSASSDAG SYW_MYCLE 205 31 KMSKSYGNAVF O67115 261 28 KMSKSSKNQNG SYW_MYCPN 200 31 KMSKSHQGANH SYW_HELPY 208 31 KMSKSDINSKN O42875 225 31 KMSKSDPNHDS SYWM_YEAST 244 31 KMSKSLGNAIF SYW_TREPA 195 29 KMSKSIGNAIY SYW_CLOLO 201 32 KMSKSANNAIY O84589 201 29 KMSASDPNSSI SYW_HUMAN 349 22 KMSASDPNSSI SYW_RABIT 353 22 KMSASDPNSSI SYW_MOUSE 353 22 KMSKSNPDQNG SYW_MYCGE 200 31 KMSKSLDNAIF SYW_BORBU 200 30 KMSASKDSSAI SYW_SCHPO 275 22 KMSASDPNSSI SYW_BOVIN 353 22 KMSKSSGGPRS SYWM_CAEEL 219 32 KMSSSKPETAI SYW_METJA 255 23 KMSASKPETAI O59584 168 22 KMSASDDTTAI SYWC_YEAST 295 22 KMSSNRPKSAI SYW_METTH 251 24 KMSSSKPESYI SYW_ARCFU 308 83

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